RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 DYTNA2CJ06 578 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 CTAGE9A4FU28 777 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 ZNF839A8K0R7 811 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 CCNDBP1O95273 360 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 SYF2O95926 243 aaKnown RBP12.5□□□□□ -0.41
RPS28-204ENST00000602140 SERPINA7P05543 415 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 HEXBP07686 556 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 UQCRHP07919 91 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 CELA2AP08217 269 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 F7P08709 466 aaPredicted RBP12.5□□□□□ -0.41
RPS28-204ENST00000602140 ANXA5P08758 320 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 EZRP15311 586 aaKnown RBP12.5□□□□□ -0.41
RPS28-204ENST00000602140 FDXRP22570 491 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 CXCR5P32302 372 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 SOX11P35716 441 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 HSD17B2P37059 387 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 SLC26A3P40879 764 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 CLCN7P51798 805 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 PER3P56645 1201 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 GPS1Q13098 491 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 CUL1Q13616 776 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 SYT16Q17RD7 645 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 TTLL9Q3SXZ7 439 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 GARNL3Q5VVW2 1013 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 ANKRD22Q5VYY1 191 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 ZNF470Q6ECI4 717 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 RPUSD3Q6P087 351 aaKnown RBP12.5□□□□□ -0.41
RPS28-204ENST00000602140 ADCK2Q7Z695 626 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 CAND1Q86VP6 1230 aaKnown RBP12.5□□□□□ -0.41
RPS28-204ENST00000602140 ARHGEF39Q8N4T4 335 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 BCORP1Q8N888 145 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 PRELID2Q8N945 189 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 GIMAP7Q8NHV1 300 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 ZNF480Q8WV37 535 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 SLX1AQ9BQ83 275 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 DRC3Q9H069 523 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 MKKSQ9NPJ1 570 aaPredicted RBP12.5□□□□□ -0.41
RPS28-204ENST00000602140 HOMER3Q9NSC5 361 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 C14orf105Q9NVL8 296 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 INTS10Q9NVR2 710 aaKnown RBP12.5□□□□□ -0.41
RPS28-204ENST00000602140 SAMD15Q9P1V8 674 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 PCYOX1Q9UHG3 505 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 POLEQ07864 2286 aa12.5□□□□□ -0.41
RPS28-204ENST00000602140 CACNA1DQ01668 2161 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.49□□□□□ -0.41
RPS28-204ENST00000602140 A0A0A6YYC8 382 aaPredicted RBP12.49□□□□□ -0.41
RPS28-204ENST00000602140 A0A1W2PQ72 361 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 E7ENX8 843 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 I3L1I5 382 aaPredicted RBP12.49□□□□□ -0.41
RPS28-204ENST00000602140 SMAPO00193 183 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 TXNDC9O14530 226 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 HAT1O14929 419 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 P2RX6O15547 441 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 FOXS1O43638 330 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 JRKO75564 520 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 WFS1O76024 890 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 BMP10O95393 424 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 F10P00742 488 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 MAGEA6P43360 314 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 TNFSF10P50591 281 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 TAP2Q03519 686 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 RELAQ04206 551 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 CTBP1Q13363 440 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 THOC5Q13769 683 aaKnown RBP12.49□□□□□ -0.41
RPS28-204ENST00000602140 DHX34Q14147 1143 aaKnown RBP12.49□□□□□ -0.41
RPS28-204ENST00000602140 THEMIS2Q5TEJ8 643 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 ARMC3Q5W041 872 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 NEK10Q6ZWH5 1172 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 PLD3Q8IV08 490 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 DENND6AQ8IWF6 608 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 AMER2Q8N7J2 671 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 FBXO15Q8NCQ5 510 aaPredicted RBP12.49□□□□□ -0.41
RPS28-204ENST00000602140 ASB11Q8WXH4 323 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 HAS2Q92819 552 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 ZNF669Q96BR6 464 aaPredicted RBP12.49□□□□□ -0.41
RPS28-204ENST00000602140 TGIF2Q9GZN2 237 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 CCDC68Q9H2F9 335 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 FBXO6Q9NRD1 293 aaPredicted RBP12.49□□□□□ -0.41
RPS28-204ENST00000602140 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 MKL2Q9ULH7 1088 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 CROCCQ5TZA2 2017 aa12.49□□□□□ -0.41
RPS28-204ENST00000602140 LRBAP50851 2863 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 CNTRLQ7Z7A1 2325 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 LOC102723996A0A087X1L8 192 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 TRAV17A0A0B4J275 112 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 FAM237BA0A1B0GVD1 139 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 MAGEB16A2A368 324 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 GFYI3L273 518 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 PCDH17O14917 1159 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 ZG16O60844 167 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 KRT14P02533 472 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 STATHP02808 62 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 STSP08842 583 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 CCDC175P0C221 793 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 MPC1LP0DKB6 136 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 ITGAMP11215 1152 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 EFNA3P52797 238 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 ABATP80404 500 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 MAT1AQ00266 395 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms