RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TMEFF1Q8IYR6 380 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 LCN9Q8WX39 176 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 AIF1LQ9BQI0 150 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 NMRK1Q9NWW6 199 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 APOBEC3BQ9UH17 382 aaKnown RBP17■□□□□ 0.31
SHKBP1-224ENST00000600718 NDUFAF1Q9Y375 327 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 LRP4O75096 1905 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 KIR2DS5A0A0G2JLQ3 304 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 A0A0G2JNG1 304 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 KIR2DS3K7RE56 304 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 PRICKLE3O43900 615 aaPredicted RBP17■□□□□ 0.31
SHKBP1-224ENST00000600718 PRPS2P11908 318 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 KIR2DS5Q14953 304 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 WDR45BQ5MNZ6 344 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 TMIGD1Q6UXZ0 262 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 TRIM48Q8IWZ4 208 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 FAM9CQ8IZT9 166 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 DSELQ8IZU8 1212 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 OR4K1Q8NGD4 311 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 OR2A1Q8NGT9 310 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 PROKR1Q8TCW9 393 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 NT5DC2Q9H857 520 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 ADGRE2Q9UHX3 823 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 PLXND1Q9Y4D7 1925 aa17■□□□□ 0.31
SHKBP1-224ENST00000600718 FAM234BA2RU67 622 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 MAGEB17A8MXT2 336 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 NR5A2O00482 541 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 FBP2O00757 339 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 AMD1P17707 334 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 PSMB5P28074 263 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 PIK3CBP42338 1070 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 POLR2JP52435 117 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 CLNS1AP54105 237 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 KCNK10P57789 538 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 PHEXP78562 749 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 ABATP80404 500 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 RNF175Q8N4F7 328 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 APIPQ96GX9 242 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 RSRC1Q96IZ7 334 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 NPAS2Q99743 824 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 THTPAQ9BU02 230 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 POT1Q9NUX5 634 aa16.99■□□□□ 0.31
SHKBP1-224ENST00000600718 DYTNA2CJ06 578 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 ANKRD28O15084 1053 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 CCNDBP1O95273 360 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 VIPP01282 170 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 BCKDHAP12694 445 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 NME1P15531 152 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 JAK1P23458 1154 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 MEF2AQ02078 507 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 ELOCQ15369 112 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 PRRT3Q5FWE3 981 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 REP15Q6BDI9 236 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 WDR5BQ86VZ2 330 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 DEFB107AQ8IZN7 70 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 LIX1Q8N485 282 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 OR4E2Q8NGC2 313 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 FCRL1Q96LA6 429 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 TEX37Q96LM6 180 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 SPNS1Q9H2V7 528 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 SRMSQ9H3Y6 488 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 CAAP1Q9H8G2 361 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 PRM3Q9NNZ6 103 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 PRMT8Q9NR22 394 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 CUEDC1Q9NWM3 386 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 PPT2Q9UMR5 302 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 CELA2BP08218 269 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 FNTBP49356 437 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 NXPH1P58417 271 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 RPS13P62277 151 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 YBX1P67809 324 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 C1orf61Q13536 156 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 RCAN2Q14206 197 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 COQ5Q5HYK3 327 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 TSSK4Q6SA08 328 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 LAYNQ6UX15 382 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 SCUBE1Q8IWY4 988 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 PCYOX1LQ8NBM8 494 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 SPDL1Q96EA4 605 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 NECAB3Q96P71 396 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 ZBTB18Q99592 522 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 LRRC61Q9BV99 259 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 RHBGQ9H310 441 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 ACTL8Q9H568 366 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 SLC52A3Q9NQ40 469 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 BATF3Q9NR55 127 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 CPNE7Q9UBL6 633 aa16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 RUVBL1Q9Y265 456 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-224ENST00000600718 H7BY64 318 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 MRASO14807 208 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 ANGPT2O15123 496 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 VILLO15195 856 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 CHRM5P08912 532 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 HRH2P25021 359 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 IL12AP29459 219 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 SERPINB1P30740 379 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 ZFP36L2P47974 494 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 RAP1GDS1P52306 607 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 UBE2IP63279 158 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 REEP5Q00765 189 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms