RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 OR2A5Q96R48 311 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 NDC1Q9BTX1 674 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 EFHD1Q9BUP0 239 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 EPB41L4BQ9H329 900 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 ALG9Q9H6U8 611 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 TMEM184CQ9NVA4 438 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 ACOT9Q9Y305 439 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 SPTBP11277 2137 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 EXOC1LA0A1B0GW35 172 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 FITM1A5D6W6 292 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 ZNF891A8MT65 544 aaPredicted RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 TAPBPO15533 448 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 LTA4HP09960 611 aaKnown RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 EZRP15311 586 aaKnown RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 ITGAXP20702 1163 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 ALAS2P22557 587 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 GCAP28676 217 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 TYK2P29597 1187 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 GDF5P43026 501 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 SERPINB8P50452 374 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 MEF2AQ02078 507 aaPredicted RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 SLC29A2Q14542 456 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 GRM7Q14831 915 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 SLC9A5Q14940 896 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 TBC1D1Q86TI0 1168 aaPredicted RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 ISCA2Q86U28 154 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 THOC6Q86W42 341 aaKnown RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 EIF1ADQ8N9N8 165 aaKnown RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 TTC29Q8NA56 475 aaPredicted RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 EXT2Q93063 718 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 HAUS8Q9BT25 410 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 ACTL8Q9H568 366 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 ENAMQ9NRM1 1142 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 CUTCQ9NTM9 273 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 TXLNGQ9NUQ3 528 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.54□□□□□ -0.08
LIG1-219ENST00000600055 NDOR1Q9UHB4 597 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 KCND3Q9UK17 655 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 TLK1Q9UKI8 766 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 RNF112Q9ULX5 631 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 SRPK3Q9UPE1 567 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 SLC22A14Q9Y267 594 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 FARSAQ9Y285 508 aaKnown RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 PCDHGA6Q9Y5G7 932 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 IKBKGQ9Y6K9 419 aa14.54□□□□□ -0.08
LIG1-219ENST00000600055 V9GYY5 206 aaPredicted RBP14.54□□□□□ -0.08
LIG1-219ENST00000600055 PTPRQQ9UMZ3 2332 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 A0A087X1B8 175 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 A0A096LPK6 155 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 FEZF1A0PJY2 475 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 HYKKA2RU49 373 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 C21orf140B9A014 251 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 P2RX6O15547 441 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 LCMT2O60294 686 aaKnown RBP14.53□□□□□ -0.08
LIG1-219ENST00000600055 SLU7O95391 586 aaKnown RBP14.53□□□□□ -0.08
LIG1-219ENST00000600055 FURINP09958 794 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 AGXTP21549 392 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 HRH2P25021 359 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 TNFRSF8P28908 595 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 PTPN4P29074 926 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 SERPINB9P50453 376 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 ERV3-1Q14264 604 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 HKDC1Q2TB90 917 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 PRTGQ2VWP7 1150 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 CATSPEREQ5SY80 951 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 METTL27Q8N6F8 245 aaPredicted RBP14.53□□□□□ -0.08
LIG1-219ENST00000600055 ENDOVQ8N8Q3 282 aaKnown RBP14.53□□□□□ -0.08
LIG1-219ENST00000600055 PROKR1Q8TCW9 393 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.53□□□□□ -0.08
LIG1-219ENST00000600055 NEIL2Q969S2 332 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 ESAMQ96AP7 390 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 TSNARE1Q96NA8 513 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 TMEM79Q9BSE2 394 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 DHRS4Q9BTZ2 278 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 VPS11Q9H270 941 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 SPNS1Q9H2V7 528 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 NMRAL1Q9HBL8 299 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 SLC22A11Q9NSA0 550 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 CD274Q9NZQ7 290 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 ZNF180Q9UJW8 692 aa14.53□□□□□ -0.08
LIG1-219ENST00000600055 TRIM49D1C9J1S8 452 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 DSCR3O14972 297 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 CREG1O75629 220 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 WDR47O94967 919 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 SLC26A3P40879 764 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 BCL6P41182 706 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 MAGEA12P43365 314 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 SLC6A12P48065 614 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 GLRBP48167 497 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 HNMTP50135 292 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 ARSFP54793 590 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 FOXL2P58012 376 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 VSNL1P62760 191 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 RPS15P62841 145 aaKnown RBP14.52□□□□□ -0.09
LIG1-219ENST00000600055 SNRPNP63162 240 aaKnown RBP14.52□□□□□ -0.09
LIG1-219ENST00000600055 DCDP81605 110 aaKnown RBP14.52□□□□□ -0.09
LIG1-219ENST00000600055 RELAQ04206 551 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 CDC20Q12834 499 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 NKAIN1Q4KMZ8 207 aa14.52□□□□□ -0.09
LIG1-219ENST00000600055 TAF1BQ53T94 588 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms