RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 H0YGG7 62 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 H7BY64 318 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 FANCGO15287 622 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 CAPN1P07384 714 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 STX2P32856 288 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 AVPR1BP47901 424 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 ARF3P61204 181 aaPredicted RBP13.51□□□□□ -0.25
LIG1-218ENST00000599322 TBPL1P62380 186 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 POU4F1Q01851 419 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 KCNC4Q03721 635 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 KLRB1Q12918 225 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 FASTKD3Q14CZ7 662 aaKnown RBP13.51□□□□□ -0.25
LIG1-218ENST00000599322 FRMPD2BQ6IN97 320 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 FBXO42Q6P3S6 717 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 ASB18Q6ZVZ8 466 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 CYS1Q717R9 158 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 ZNF572Q7Z3I7 529 aaPredicted RBP13.51□□□□□ -0.25
LIG1-218ENST00000599322 ZC3HC1Q86WB0 502 aaKnown RBP13.51□□□□□ -0.25
LIG1-218ENST00000599322 HPS6Q86YV9 775 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 MVB12AQ96EY5 273 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 PRAP1Q96NZ9 151 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 CPNE1Q99829 537 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 EGFL8Q99944 293 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 TRIM4Q9C037 500 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 ATG10Q9H0Y0 220 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 POPDC3Q9HBV1 291 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 GPAMQ9HCL2 828 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 SLC17A6Q9P2U8 582 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 CTNNAL1Q9UBT7 734 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 ZNF282Q9UDV7 671 aaPredicted RBP13.51□□□□□ -0.25
LIG1-218ENST00000599322 ADAMTS6Q9UKP5 1117 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 NOVA2Q9UNW9 492 aaKnown RBP13.51□□□□□ -0.25
LIG1-218ENST00000599322 DYRK1BQ9Y463 629 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 PCDHGB7Q9Y5F8 929 aa13.51□□□□□ -0.25
LIG1-218ENST00000599322 LOC105369274A0A096LPK9 316 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 LOC102723532A0A0G2JNH3 316 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 GUCA1CO95843 209 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 ALPPP05187 535 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 CTSBP07858 339 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 FBLP22087 321 aaKnown RBP13.5□□□□□ -0.25
LIG1-218ENST00000599322 SSTR1P30872 391 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 PHBP35232 272 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 SPRP35270 261 aaPredicted RBP13.5□□□□□ -0.25
LIG1-218ENST00000599322 MAGEA4P43358 317 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 OR1D4P47884 311 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 CSHL1Q14406 222 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 USP10Q14694 798 aaKnown RBP13.5□□□□□ -0.25
LIG1-218ENST00000599322 ZNF425Q6IV72 752 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 MRPL14Q6P1L8 145 aaKnown RBP13.5□□□□□ -0.25
LIG1-218ENST00000599322 LCTLQ6UWM7 567 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 ADAMTSL2Q86TH1 951 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 OR4N4Q8N0Y3 316 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 CAMKVQ8NCB2 501 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 MIEF2Q96C03 454 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 ATP13A2Q9NQ11 1180 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 ENAMQ9NRM1 1142 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 TP53TG5Q9Y2B4 290 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 ZNF451Q9Y4E5 1061 aa13.5□□□□□ -0.25
LIG1-218ENST00000599322 PCDHGA9Q9Y5G4 932 aaKnown RBP13.5□□□□□ -0.25
LIG1-218ENST00000599322 UBR5O95071 2799 aaPredicted RBP13.49□□□□□ -0.25
LIG1-218ENST00000599322 CTAGE15A4D2H0 777 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 A6NL46 340 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 SUV39H1O43463 412 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 KLF7O75840 302 aaPredicted RBP13.49□□□□□ -0.25
LIG1-218ENST00000599322 ONECUT2O95948 504 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 CTAGE8P0CG41 777 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 STMN1P16949 149 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 ZNF37AP17032 561 aaPredicted RBP13.49□□□□□ -0.25
LIG1-218ENST00000599322 CXCR2P25025 360 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 GP5P40197 560 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 HNMTP50135 292 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 CCR8P51685 355 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 SKP1P63208 163 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 CHAF1BQ13112 559 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 NAB1Q13506 487 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 ATP1A4Q13733 1029 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 RBBP7Q16576 425 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 GRTP1Q5TC63 336 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 MRGPREQ86SM8 312 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 CTAGE6Q86UF2 777 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 CTAGE4Q8IX94 777 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 METTL27Q8N6F8 245 aaPredicted RBP13.49□□□□□ -0.25
LIG1-218ENST00000599322 KIF18AQ8NI77 898 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 FBXO25Q8TCJ0 367 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 ADAMTS17Q8TE56 1095 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 FBXL8Q96CD0 374 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 MMABQ96EY8 250 aaPredicted RBP13.49□□□□□ -0.25
LIG1-218ENST00000599322 OLFM1Q99784 485 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 WDR83Q9BRX9 315 aaKnown RBP13.49□□□□□ -0.25
LIG1-218ENST00000599322 DRC3Q9H069 523 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 SLC26A1Q9H2B4 701 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 PLAC1Q9HBJ0 212 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 SEMA3GQ9NS98 782 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 GPR83Q9NYM4 423 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 GRHL1Q9NZI5 618 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 MAU2Q9Y6X3 613 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 SPTBP11277 2137 aa13.49□□□□□ -0.25
LIG1-218ENST00000599322 TCRBV9S1A1TA0A576 114 aa13.48□□□□□ -0.25
LIG1-218ENST00000599322 TP73O15350 636 aa13.48□□□□□ -0.25
LIG1-218ENST00000599322 DPM1O60762 260 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms