RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 PCDH15Q96QU1 1955 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 SDHDO14521 159 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 RGS14O43566 566 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 PRAMEF4O60810 478 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 SERPINB1P30740 379 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 PLA2G5P39877 138 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 GPR3P46089 330 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 CAPZBP47756 277 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 REEP5Q00765 189 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 SLC9B1Q4ZJI4 515 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 TCHHL1Q5QJ38 904 aaPredicted RBP14.87□□□□□ -0.03
UPF1-206ENST00000598471 PRAMEF9Q5VWM5 478 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 ALYREFQ86V81 257 aaKnown RBP14.87□□□□□ -0.03
UPF1-206ENST00000598471 FAM181AQ8N9Y4 354 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 CEP70Q8NHQ1 597 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 ACTRT2Q8TDY3 377 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 USP7Q93009 1102 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 MAELQ96JY0 434 aaKnown RBP14.87□□□□□ -0.03
UPF1-206ENST00000598471 EBF4Q9BQW3 602 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 TWSG1Q9GZX9 223 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 SMOC1Q9H4F8 434 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 NT5DC2Q9H857 520 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 CUEDC1Q9NWM3 386 aaPredicted RBP14.87□□□□□ -0.03
UPF1-206ENST00000598471 GEMIN8Q9NWZ8 242 aaKnown RBP14.87□□□□□ -0.03
UPF1-206ENST00000598471 ADGRE2Q9UHX3 823 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 PADI4Q9UM07 663 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 PCDHGB2Q9Y5G2 931 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 KNL1Q8NG31 2342 aa14.87□□□□□ -0.03
UPF1-206ENST00000598471 GOLGA8QA0A0J9YX86 632 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 A0A0J9YY10 115 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 GOLGA8OA6NCC3 632 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 GOLGA8NF8WBI6 632 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 H7BY64 318 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 TRIM38O00635 465 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 JUNP05412 331 aaKnown RBP14.86□□□□□ -0.03
UPF1-206ENST00000598471 ZNF806P0C7X5 589 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 LINC00032P0C843 101 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 PCNAP12004 261 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 HSD3B1P14060 373 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 TYRP1P17643 537 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 CD22P20273 847 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 HSD3B2P26439 372 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 EPHA3P29320 983 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 HTR6P50406 440 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 GPLD1P80108 840 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 CSTF3Q12996 717 aaKnown RBP14.86□□□□□ -0.03
UPF1-206ENST00000598471 SGO1Q5FBB7 561 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 XKR7Q5GH72 579 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 SPESP1Q6UW49 350 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 TMIGD1Q6UXZ0 262 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 ZNF438Q7Z4V0 828 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 FAM129CQ86XR2 697 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 LAS2Q8IYD9 372 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 EID2Q8N6I1 236 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 GBP7Q8N8V2 638 aaPredicted RBP14.86□□□□□ -0.03
UPF1-206ENST00000598471 OR4K1Q8NGD4 311 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 OR2I1PQ8NGU4 316 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 NAT6Q93015 286 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 TUBGCP3Q96CW5 907 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 AHCYL2Q96HN2 611 aaKnown RBP14.86□□□□□ -0.03
UPF1-206ENST00000598471 APOLD1Q96LR9 279 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 PRAP1Q96NZ9 151 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 OR2A14Q96R47 310 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 ZMYND15Q9H091 742 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 TUBB1Q9H4B7 451 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 WDR55Q9H6Y2 383 aaPredicted RBP14.86□□□□□ -0.03
UPF1-206ENST00000598471 MRGBPQ9NV56 204 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 HEY2Q9UBP5 337 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 PI4KAP42356 2102 aa14.86□□□□□ -0.03
UPF1-206ENST00000598471 TRBC2A0A5B9 178 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 SERTM1A2A2V5 107 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 SIGLEC6O43699 453 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 DUX1O43812 170 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 GFRA3O60609 400 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 CCDC22O60826 627 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 PDYNP01213 254 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 PNLIPP16233 465 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 GSTM2P28161 218 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 GRK6P43250 576 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 DUSP3P51452 185 aaPredicted RBP14.85□□□□□ -0.03
UPF1-206ENST00000598471 CSNK1G2P78368 415 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 NR1D2Q14995 579 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 ABRAXAS2Q15018 415 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 RBBP5Q15291 538 aaKnown RBP14.85□□□□□ -0.03
UPF1-206ENST00000598471 NR6A1Q15406 480 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 METTL21CQ5VZV1 264 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 TCEAL6Q6IPX3 200 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 SCIMPQ6UWF3 145 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 TRIM46Q7Z4K8 759 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 TTLQ8NG68 377 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 OR7G3Q8NG95 312 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 WDR20Q8TBZ3 569 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 RSC1A1Q92681 617 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 TCEAL3Q969E4 200 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 PPP3R2Q96LZ3 170 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 OR52B2Q96RD2 323 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 DPH7Q9BTV6 452 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 BRF2Q9HAW0 419 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 SLC6A20Q9NP91 592 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 DNAAF2Q9NVR5 837 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms