RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 DEFB109BQ30KR1 87 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 CAPN13Q6MZZ7 669 aaPredicted RBP15.99■□□□□ 0.15
SSBP4-204ENST00000597724 ADCK2Q7Z695 626 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 ADAMTSL2Q86TH1 951 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 C17orf64Q86WR6 236 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 SPATA6LQ8N4H0 392 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 EXD3Q8N9H8 876 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 ALKBH8Q96BT7 664 aaKnown RBP15.99■□□□□ 0.15
SSBP4-204ENST00000597724 PYCR2Q96C36 320 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 UBXN10Q96LJ8 280 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 ARHGAP9Q9BRR9 750 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 FUT8Q9BYC5 575 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 ACSS3Q9H6R3 686 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 SYNPO2LQ9H987 977 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 SH2B3Q9UQQ2 575 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 OARD1Q9Y530 152 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 MDC1Q14676 2089 aaKnown RBP15.99■□□□□ 0.15
SSBP4-204ENST00000597724 HYKKA2RU49 373 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 CDC14CA4D256 554 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 KLF7O75840 302 aaPredicted RBP15.98■□□□□ 0.15
SSBP4-204ENST00000597724 ONECUT2O95948 504 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 ITGAXP20702 1163 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 CSNK1G2P78368 415 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 UGT8Q16880 541 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 PRTGQ2VWP7 1150 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 MLIPQ5VWP3 458 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 PLD3Q8IV08 490 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 IFT20Q8IY31 132 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 MRRFQ96E11 262 aaKnown RBP15.98■□□□□ 0.15
SSBP4-204ENST00000597724 HAUS8Q9BT25 410 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 DHRS4Q9BTZ2 278 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 UNKQ9C0B0 810 aaKnown RBP15.98■□□□□ 0.15
SSBP4-204ENST00000597724 L2HGDHQ9H9P8 463 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 SLC22A11Q9NSA0 550 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 IFT80Q9P2H3 777 aaPredicted RBP15.98■□□□□ 0.15
SSBP4-204ENST00000597724 NDOR1Q9UHB4 597 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 NFU1Q9UMS0 254 aa15.98■□□□□ 0.15
SSBP4-204ENST00000597724 MED26O95402 600 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 ACSL3O95573 720 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 ANXA5P08758 320 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 CD63P08962 238 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 RHOXF2BP0C7M4 288 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 FAM87AP0C7U9 286 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 CD1DP15813 335 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 CCR10P46092 362 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 EMP3P54852 163 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 ATP6V0D1P61421 351 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 IL10RAQ13651 578 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 SLC9A5Q14940 896 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 SLMAPQ14BN4 828 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 TGFBIQ15582 683 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 FAM69BQ5VUD6 431 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 MRPL14Q6P1L8 145 aaKnown RBP15.97■□□□□ 0.15
SSBP4-204ENST00000597724 FRA10AC1Q70Z53 315 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 CMC1Q7Z7K0 106 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 LRRN4CLQ8ND94 238 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 ADAMTS17Q8TE56 1095 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 APOBEC4Q8WW27 367 aaKnown RBP15.97■□□□□ 0.15
SSBP4-204ENST00000597724 OR4K3Q96R72 315 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 EGFL8Q99944 293 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 RHOXF2Q9BQY4 288 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 GPN3Q9UHW5 284 aaPredicted RBP15.97■□□□□ 0.15
SSBP4-204ENST00000597724 POLHQ9Y253 713 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 KCNMB2Q9Y691 235 aa15.97■□□□□ 0.15
SSBP4-204ENST00000597724 TLN1Q9Y490 2541 aaKnown RBP15.96■□□□□ 0.15
SSBP4-204ENST00000597724 CCDC88CQ9P219 2028 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 KCNE1BA0A087WTH5 132 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 HMX2A2RU54 273 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 EIF4E1BA6NMX2 242 aaKnown RBP15.96■□□□□ 0.15
SSBP4-204ENST00000597724 CNOT3O75175 753 aaKnown RBP15.96■□□□□ 0.15
SSBP4-204ENST00000597724 PRB1P04280 392 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 SLC35E2BP0CK96 405 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 PIM1P11309 404 aaPredicted RBP15.96■□□□□ 0.15
SSBP4-204ENST00000597724 CDH1P12830 882 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 CRABP2P29373 138 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 HNMTP50135 292 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 RPS15AP62244 130 aaKnown RBP15.96■□□□□ 0.15
SSBP4-204ENST00000597724 MUM1Q2TAK8 710 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 HKDC1Q2TB90 917 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 MROH9Q5TGP6 573 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 RAPH1Q70E73 1250 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 OVCH1Q7RTY7 1134 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 ARHGEF39Q8N4T4 335 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 DTWD1Q8N5C7 304 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 CSNK1A1LQ8N752 337 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 ABHD11Q8NFV4 315 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 RERGQ96A58 199 aaPredicted RBP15.96■□□□□ 0.15
SSBP4-204ENST00000597724 C10orf90Q96M02 699 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 SEMA4CQ9C0C4 833 aa15.96■□□□□ 0.15
SSBP4-204ENST00000597724 RUVBL1Q9Y265 456 aaKnown RBP15.96■□□□□ 0.15
SSBP4-204ENST00000597724 TXNDC9O14530 226 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 P2RX6O15547 441 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 LCMT2O60294 686 aaKnown RBP15.95■□□□□ 0.14
SSBP4-204ENST00000597724 ALBP02768 609 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 GMPRP36959 345 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 SLC26A3P40879 764 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 OR1D4P47884 311 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 CSRP3P50461 194 aa15.95■□□□□ 0.14
SSBP4-204ENST00000597724 POLE2P56282 527 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms