RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 YOD1Q5VVQ6 348 aaPredicted RBP13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 CES4AQ5XG92 561 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 TMEM198Q66K66 360 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 SPINK14Q6IE38 97 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 SERPINA9Q86WD7 417 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 BEST3Q8N1M1 668 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 MARVELD2Q8N4S9 558 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 OR5K2Q8NHB8 316 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 ULK4Q96C45 1275 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 FRMD6Q96NE9 622 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 IL17FQ96PD4 163 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 RIC8BQ9NVN3 520 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 DNAJB12Q9NXW2 375 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 ZDHHC3Q9NYG2 299 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 ASB1Q9Y576 335 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 IGLV3-16A0A075B6K0 115 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 LOC105369274A0A096LPK9 316 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 LOC102723532A0A0G2JNH3 316 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 FOXO6A8MYZ6 492 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 PRRG2O14669 202 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 ZWINTO95229 277 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 TSPAN12O95859 305 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 EIF2S1P05198 315 aaKnown RBP13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 FBLP22087 321 aaKnown RBP13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 CD96P40200 585 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 TUBA3CQ13748 450 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 SF1Q15637 639 aaKnown RBP13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 RNFT1Q5M7Z0 435 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 SNX20Q7Z614 316 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 OR4N4Q8N0Y3 316 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 MDS2Q8NDY4 140 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 IMMP1LQ96LU5 166 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 C19orf43Q9BQ61 176 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 ZNF700Q9H0M5 742 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 VPS37BQ9H9H4 285 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 TRPC4Q9UBN4 977 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 ST6GALNAC2Q9UJ37 374 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 ZNF148Q9UQR1 794 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 PRSS21Q9Y6M0 314 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 ATRQ13535 2644 aa13.03□□□□□ -0.32
SHKBP1-208ENST00000595726 HCFC1P51610 2035 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 IGLV3-12A0A075B6K2 115 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 IGHV3-20A0A0C4DH32 117 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 A0A1W2PQ72 361 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 MAN1A2O60476 641 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 MLYCDO95822 493 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 IFNB1P01574 187 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 FGGP02679 453 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 HEXBP07686 556 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 HOXD4P09016 255 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 ITGALP20701 1170 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 EEF1DP29692 281 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 PKLRP30613 574 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 CSE1LP55060 971 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 SNX1Q13596 522 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 FASTKQ14296 549 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 ACER2Q5QJU3 275 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 TAS2R42Q7RTR8 314 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 GALNTL5Q7Z4T8 443 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 PRUNE1Q86TP1 453 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 CCDC71Q8IV32 467 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 GHDCQ8N2G8 530 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 LILRB4Q8NHJ6 448 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 HEXDCQ8WVB3 486 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 DNAJC1Q96KC8 554 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 MENTQ9BUN1 341 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 ETNK1Q9HBU6 452 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 PIH1D1Q9NWS0 290 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 KCNN3Q9UGI6 736 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 RNF6Q9Y252 685 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 PLEKHA6Q9Y2H5 1048 aa13.02□□□□□ -0.33
SHKBP1-208ENST00000595726 LOC102723996A0A087X1L8 192 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 A0A0J9YVX5 310 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 ASPDHA6ND91 283 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 ERI2A8K979 691 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 PSMD3O43242 534 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 PROM1O43490 865 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 SEC24DO94855 1032 aaPredicted RBP13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 ETS1P14921 441 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 TPH1P17752 444 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 CD9P21926 228 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 ACRV1P26436 265 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 MSX1P28360 303 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 MC4RP32245 332 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 CXCR5P32302 372 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 PTGER1P34995 402 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 FDFT1P37268 417 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 POU6F1Q14863 301 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 OR1C1Q15619 314 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 CCNG2Q16589 344 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 SYT16Q17RD7 645 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 PRMT9Q6P2P2 845 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 DRICH1Q6PGQ1 229 aaPredicted RBP13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 LINC00523Q86TU6 105 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 PIANPQ8IYJ0 282 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 OR52K1Q8NGK4 314 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 ELMO1Q92556 727 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms