RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TAF1CQ15572 869 aaPredicted RBP12.84□□□□□ -0.35
VRK3-209ENST00000594948 CDKN3Q16667 212 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 NOXRED1Q6NXP6 359 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 OR10Q1Q8NGQ4 319 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 CHTF18Q8WVB6 975 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 LINC01599Q8WXQ3 324 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 C7orf34Q96L11 122 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 PANX1Q96RD7 426 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 RHNO1Q9BSD3 238 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 GPR62Q9BZJ7 368 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 PCDH12Q9NPG4 1184 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 AASSQ9UDR5 926 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 KLHL3Q9UH77 587 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 IFT52Q9Y366 437 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 ZNF840PA6NDX5 716 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 GLTPD2A6NH11 291 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 MAGEB17A8MXT2 336 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 SLC16A5O15375 505 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 COCHO43405 550 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 SOCS5O75159 536 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 RPLP0P05388 317 aaKnown RBP12.83□□□□□ -0.35
VRK3-209ENST00000594948 ABCB1P08183 1280 aaPredicted RBP12.83□□□□□ -0.35
VRK3-209ENST00000594948 MPC1LP0DKB6 136 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 LIPAP38571 399 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 LIMK1P53667 647 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 LAPTM4AQ15012 233 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 MAPK11Q15759 364 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 ATAD3BQ5T9A4 648 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 MFSD14CQ5VZR4 134 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 RSPO2Q6UXX9 243 aaPredicted RBP12.83□□□□□ -0.35
VRK3-209ENST00000594948 LINGO4Q6UY18 593 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 ZSWIM9Q86XI8 627 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 CLDN19Q8N6F1 224 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 PROX1Q92786 737 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 MTFMTQ96DP5 389 aaKnown RBP12.83□□□□□ -0.35
VRK3-209ENST00000594948 APIPQ96GX9 242 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 CRELD1Q96HD1 420 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 SLC12A9Q9BXP2 914 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 REXO4Q9GZR2 422 aaKnown RBP12.83□□□□□ -0.35
VRK3-209ENST00000594948 ABCB10Q9NRK6 738 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 TMEM161AQ9NX61 479 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 SIRT5Q9NXA8 310 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 ARL15Q9NXU5 204 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 RAPGEFL1Q9UHV5 662 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 PCDHB11Q9Y5F2 797 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 PCDHGA3Q9Y5H0 932 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 OR51B4Q9Y5P0 310 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.35
VRK3-209ENST00000594948 A0A0U1RQS6 177 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 CLCA1A8K7I4 914 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 HAT1O14929 419 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 SNPHO15079 494 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 SEPT4O43236 478 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 UGDHO60701 494 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 OXSR1O95747 527 aaPredicted RBP12.83□□□□□ -0.36
VRK3-209ENST00000594948 BPIP17213 487 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 CST5P28325 142 aaPredicted RBP12.83□□□□□ -0.36
VRK3-209ENST00000594948 EPHA2P29317 976 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 S100A5P33763 92 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 OLR1P78380 273 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 SP140Q13342 867 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 EIF4HQ15056 248 aaKnown RBP12.83□□□□□ -0.36
VRK3-209ENST00000594948 UGT8Q16880 541 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 TIGD6Q17RP2 521 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 HKDC1Q2TB90 917 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 TPRG1LQ5T0D9 272 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 SLX4IPQ5VYV7 408 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 STEAP3Q658P3 488 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 ANKS3Q6ZW76 656 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 C16orf59Q7L2K0 433 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 VTCN1Q7Z7D3 282 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 DNAJC22Q8N4W6 341 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 POC5Q8NA72 575 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 DCAF4L2Q8NA75 395 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 C9orf43Q8TAL5 461 aaPredicted RBP12.83□□□□□ -0.36
VRK3-209ENST00000594948 COL21A1Q96P44 957 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 KLF16Q9BXK1 252 aaPredicted RBP12.83□□□□□ -0.36
VRK3-209ENST00000594948 HOXD1Q9GZZ0 328 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 CHST8Q9H2A9 424 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 POLE4Q9NR33 117 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 RASSF1Q9NS23 344 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 ADPRHL2Q9NX46 363 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 MARCH5Q9NX47 278 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 ZDHHC3Q9NYG2 299 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 SLCO3A1Q9UIG8 710 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 BTNL2Q9UIR0 455 aa12.83□□□□□ -0.36
VRK3-209ENST00000594948 PNMA8CA0A1B0GUJ8 204 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 ZBBXA8MT70 800 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 PLK4O00444 970 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 SCAMP3O14828 347 aaKnown RBP12.82□□□□□ -0.36
VRK3-209ENST00000594948 ASNA1O43681 348 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 DYRK3O43781 588 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 TSPAN3O60637 253 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 DIRAS1O95057 198 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 GADD45AP24522 165 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 AOAHP28039 575 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 PCGF2P35227 344 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 TUFMP49411 452 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms