RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ATG10Q9H0Y0 220 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 PARVBQ9HBI1 364 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 UTP6Q9NYH9 597 aaKnown RBP13.23□□□□□ -0.29
APOC1-208ENST00000592535 CDC23Q9UJX2 597 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 NXT1Q9UKK6 140 aaKnown RBP13.23□□□□□ -0.29
APOC1-208ENST00000592535 SH2B3Q9UQQ2 575 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 PLAAQ9Y263 795 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 HS3ST3B1Q9Y662 390 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.23□□□□□ -0.299e-6■□□□□ 11.3
APOC1-208ENST00000592535 NBASA2RRP1 2371 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 VSTM2BA6NLU5 285 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 E7ESA3 106 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 AGPSO00116 658 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 SOCS6O14544 535 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 SLC16A5O15375 505 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 P2RX6O15547 441 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 ALOX12BO75342 701 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 IGHEP01854 428 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 EMP3P54852 163 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 RELAQ04206 551 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 FRG1Q14331 258 aaKnown RBP13.22□□□□□ -0.29
APOC1-208ENST00000592535 MYBPC3Q14896 1274 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 FAM45BPQ6NSW5 357 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 AGTRAPQ6RW13 159 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 PALM2Q8IXS6 379 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 PRSS58Q8IYP2 241 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 GALNT16Q8N428 558 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 ARHGEF39Q8N4T4 335 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 RBMXL3Q8N7X1 1067 aaKnown RBP13.22□□□□□ -0.29
APOC1-208ENST00000592535 FAM45AQ8TCE6 357 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 STT3BQ8TCJ2 826 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 RERGQ96A58 199 aaPredicted RBP13.22□□□□□ -0.29
APOC1-208ENST00000592535 ALKBH8Q96BT7 664 aaKnown RBP13.22□□□□□ -0.29
APOC1-208ENST00000592535 MFRPQ9BY79 579 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 LUZP4Q9P127 313 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 ZFATQ9P243 1243 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 FBXL4Q9UKA2 621 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 CORO1CQ9ULV4 474 aaPredicted RBP13.22□□□□□ -0.29
APOC1-208ENST00000592535 VWA7Q9Y334 891 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 PSAT1Q9Y617 370 aa13.22□□□□□ -0.29
APOC1-208ENST00000592535 TTLL8A6PVC2 850 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 FFAR3O14843 346 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 GPR42O15529 346 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 DPM1O60762 260 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 SORBS2O94875 1100 aaKnown RBP13.21□□□□□ -0.29
APOC1-208ENST00000592535 STATHP02808 62 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 ZGLP1P0C6A0 271 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 FBLP22087 321 aaKnown RBP13.21□□□□□ -0.29
APOC1-208ENST00000592535 IL2P60568 153 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 SNRPNP63162 240 aaKnown RBP13.21□□□□□ -0.29
APOC1-208ENST00000592535 OCA2Q04671 838 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 KLC1Q07866 573 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 C2orf54Q08AI8 447 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 MGAT5Q09328 741 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 NAE1Q13564 534 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 RBBP7Q16576 425 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 ZXDCQ2QGD7 858 aaPredicted RBP13.21□□□□□ -0.29
APOC1-208ENST00000592535 VWA2Q5GFL6 755 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 VWA5B1Q5TIE3 1220 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 KIRREL2Q6UWL6 708 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 HPS6Q86YV9 775 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 SPATA4Q8NEY3 305 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 NACC2Q96BF6 587 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 MIEF2Q96C03 454 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 MESP1Q9BRJ9 268 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 CRB3Q9BUF7 120 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 DPH5Q9H2P9 285 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 ZNF552Q9H707 407 aaPredicted RBP13.21□□□□□ -0.29
APOC1-208ENST00000592535 ATP13A2Q9NQ11 1180 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 SEMA3GQ9NS98 782 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 TMEM184CQ9NVA4 438 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 ZNF282Q9UDV7 671 aaPredicted RBP13.21□□□□□ -0.29
APOC1-208ENST00000592535 IKZF3Q9UKT9 509 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 SCN3AQ9NY46 2000 aa13.21□□□□□ -0.29
APOC1-208ENST00000592535 SHANK1Q9Y566 2161 aa13.21□□□□□ -0.3
APOC1-208ENST00000592535 IGLV3-12A0A075B6K2 115 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 A0A0A6YYC8 382 aaPredicted RBP13.2□□□□□ -0.3
APOC1-208ENST00000592535 FAM187AA6NFU0 413 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 I3L1I5 382 aaPredicted RBP13.2□□□□□ -0.3
APOC1-208ENST00000592535 TXNDC9O14530 226 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 RAD51CO43502 376 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 FOXS1O43638 330 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 HIST1H2AGP0C0S8 130 aaPredicted RBP13.2□□□□□ -0.3
APOC1-208ENST00000592535 HIST1H2ADP20671 130 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 SAT1P21673 171 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 CASQ1P31415 396 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 CD97P48960 835 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 SOX8P57073 446 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 CSNK1G2P78368 415 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 CBLBQ13191 982 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 DSG2Q14126 1118 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 GARNL3Q5VVW2 1013 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 SLC6A19Q695T7 634 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 JMJD6Q6NYC1 403 aaPredicted RBP13.2□□□□□ -0.3
APOC1-208ENST00000592535 TMEM207Q6UWW9 146 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 CAPN12Q6ZSI9 719 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 VN1R4Q7Z5H5 301 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 STRA8Q7Z7C7 330 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 ZC3HC1Q86WB0 502 aaKnown RBP13.2□□□□□ -0.3
APOC1-208ENST00000592535 ZBED8Q8IZ13 594 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms