RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 LRRC39Q96DD0 335 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 PGAM5Q96HS1 289 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 CNOT6LQ96LI5 555 aaKnown RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 SECISBP2Q96T21 854 aaKnown RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 SEMA3CQ99985 751 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 TREX2Q9BQ50 279 aaPredicted RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 CRNKL1Q9BZJ0 848 aaKnown RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 ABCG8Q9H221 673 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 GHITMQ9H3K2 345 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 GOLPH3LQ9H4A5 285 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 TM9SF3Q9HD45 589 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 IL1RAPL2Q9NP60 686 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 CCDC177Q9NQR7 707 aaPredicted RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 FAM114A2Q9NRY5 505 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ARMC1Q9NVT9 282 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 HAUS2Q9NVX0 235 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 NMRK1Q9NWW6 199 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ANAPC5Q9UJX4 755 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 POU2F3Q9UKI9 436 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ANGPTL2Q9UKU9 493 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 KIAA1257Q9ULG3 409 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ICAM5Q9UMF0 924 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 NENFQ9UMX5 172 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 B3GALT5Q9Y2C3 310 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 SOGA1O94964 1423 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 WDR62O43379 1518 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ARHGEF37A1IGU5 675 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 OR6C74A6NCV1 312 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 AGAP14A8MT82 685 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 PRR23D1E9PI22 279 aaPredicted RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 H0YIV9 168 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 HIP1O00291 1037 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 SMAD9O15198 467 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 ZNHIT1O43257 154 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 XPNPEP2O43895 674 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 CIDEAO60543 219 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 KERAO60938 352 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 WDR1O75083 606 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TOM1L1O75674 476 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 KLHL2O95198 593 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 GAS8O95995 478 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 IFNA14P01570 189 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 CAPN1P07384 714 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TUBBP07437 444 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 RPS17P08708 135 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 FAM106CPP0CH98 169 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 PRR23D2P0DMB1 279 aaPredicted RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 SCG2P13521 617 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 GFAPP14136 432 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 AKR1B1P15121 316 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 PORP16435 677 aaPredicted RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 KCNA5P22460 613 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 DNAJB1P25685 340 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 PON1P27169 355 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 PHBP35232 272 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 RFC4P35249 363 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 HOXD13P35453 343 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 PSMB10P40306 273 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 IL15P40933 162 aaPredicted RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 ALDH3A2P51648 485 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ARHGDIBP52566 201 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ATP12AP54707 1039 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TSPAN5P62079 268 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 UBE2IP63279 158 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 MC1RQ01726 317 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 OTUD4Q01804 1114 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 KDSRQ06136 332 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 GFPT1Q06210 699 aaPredicted RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 SPOCK1Q08629 439 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ARL16Q0P5N6 197 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ILF2Q12905 390 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 RCN2Q14257 317 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 DMC1Q14565 340 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 IRF3Q14653 427 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 DPYSL2Q16555 572 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 SYT16Q17RD7 645 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 RGS21Q2M5E4 152 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TMEM35AQ53FP2 167 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TPGS2Q68CL5 300 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ATL3Q6DD88 541 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TTC23LQ6PF05 361 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 C6orf89Q6UWU4 347 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ENOSF1Q7L5Y1 443 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 SZRD1Q7Z422 152 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 CD302Q8IX05 232 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 SYCE1Q8N0S2 351 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TCAIMQ8N3R3 496 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ARFGAP2Q8N6H7 521 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 EMC1Q8N766 993 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 IL17RCQ8NAC3 791 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 SLC38A9Q8NBW4 561 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ZBTB44Q8NCP5 570 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 GOT1L1Q8NHS2 421 aaPredicted RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 IRGQQ8WZA9 623 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 P3H4Q92791 437 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 LRRC59Q96AG4 307 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 FEM1CQ96JP0 617 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 CENPKQ9BS16 269 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 CCDC28BQ9BUN5 200 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms