RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 RNF44Q7L0R7 432 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 TAX1BP1Q86VP1 789 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 CREG2Q8IUH2 290 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 OR4N4Q8N0Y3 316 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 VWA5B2Q8N398 1253 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 ST6GALNAC3Q8NDV1 305 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 OR9A1PQ8NGU1 263 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 DNAJB14Q8TBM8 379 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 NANOS1Q8WY41 292 aaKnown RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 MVB12AQ96EY5 273 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 C16orf45Q96MC5 204 aaPredicted RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 C5orf34Q96MH7 638 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 MIPEPQ99797 713 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 SOX17Q9H6I2 414 aaPredicted RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 CTSFQ9UBX1 484 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 ZNF282Q9UDV7 671 aaPredicted RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 ZC3H7BQ9UGR2 993 aaKnown RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 ASIC3Q9UHC3 531 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 SOX13Q9UN79 622 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 NOVA2Q9UNW9 492 aaKnown RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 CSAG2Q9Y5P2 127 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 FAM169AQ9Y6X4 670 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 A0A0J9YVX5 310 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 MYO1CO00159 1063 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 PFDN6O15212 129 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 AVILO75366 819 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 PSIP1O75475 530 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 CLDN1O95832 211 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 OGNP20774 298 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 MGAT1P26572 445 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 PSMB5P28074 263 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 CMPK1P30085 196 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 FMO4P31512 558 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 HSD17B2P37059 387 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 PAFAH1B1P43034 410 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 MAGEA6P43360 314 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 BDKRB1P46663 353 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 FNTAP49354 379 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 EIF3BP55884 814 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 YBX1P67809 324 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 MRPS25P82663 173 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 OCA2Q04671 838 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 PRDX1Q06830 199 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 KLC1Q07866 573 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 ELOAQ14241 798 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 FASTKQ14296 549 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 KCNJ11Q14654 390 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 TLR1Q15399 786 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 RBBP7Q16576 425 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 HIF1AQ16665 826 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 MUM1Q2TAK8 710 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 ANKRD20A4Q4UJ75 823 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 IRAK1BP1Q5VVH5 260 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 CNSTQ6PJW8 725 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 CES3Q6UWW8 571 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 ISLR2Q6UXK2 745 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 SHISA6Q6ZSJ9 500 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 NEK10Q6ZWH5 1172 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 CENPUQ71F23 418 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 ARHGEF39Q8N4T4 335 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 FBXO15Q8NCQ5 510 aaPredicted RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 GRK7Q8WTQ7 553 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 SKA2Q8WVK7 121 aaPredicted RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 FAR1Q8WVX9 515 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 SMPDL3AQ92484 453 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 PSMF1Q92530 271 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 ZNF592Q92610 1267 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 MIEF2Q96C03 454 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 ZFYVE21Q9BQ24 234 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 PLCD4Q9BRC7 762 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 TRIM56Q9BRZ2 755 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 DPH7Q9BTV6 452 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 CRB3Q9BUF7 120 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 SYBUQ9NX95 663 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 KLHL42Q9P2K6 505 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 CDC14AQ9UNH5 594 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 RUVBL2Q9Y230 463 aaKnown RBP9.91□□□□□ -0.82
VPS4B-207ENST00000591519 MAU2Q9Y6X3 613 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 ITPR2Q14571 2701 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 HEATR5BQ9P2D3 2071 aa9.91□□□□□ -0.82
VPS4B-207ENST00000591519 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.9□□□□□ -0.82
VPS4B-207ENST00000591519 IGKV1-8A0A0C4DH67 115 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 A1L4Q6 167 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 MAGEB16A2A368 324 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 KRT87PA6NCN2 255 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 ARHGEF33A8MVX0 844 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 H0YGG7 62 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 PCDH17O14917 1159 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 NRP2O60462 931 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 NIPSNAP2O75323 286 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 ALOX12BO75342 701 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 KLHL18O94889 574 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 EDN3P14138 238 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 PKMP14618 531 aaKnown RBP9.9□□□□□ -0.82
VPS4B-207ENST00000591519 CHRM3P20309 590 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 FDXRP22570 491 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 SLC26A3P40879 764 aa9.9□□□□□ -0.82
VPS4B-207ENST00000591519 ARF3P61204 181 aaPredicted RBP9.9□□□□□ -0.82
VPS4B-207ENST00000591519 ETF1P62495 437 aaKnown RBP9.9□□□□□ -0.82
VPS4B-207ENST00000591519 C2orf54Q08AI8 447 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms