RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ZNF697Q5TEC3 545 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 SLC15A4Q8N697 577 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 FRS2Q8WU20 508 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 RIMKLBQ9ULI2 386 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 MROH6A6NGR9 719 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 M0QX08 132 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 TNFRSF21O75509 655 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 EIF2S1P05198 315 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF730Q6ZMV8 503 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 USP30Q70CQ3 517 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF461Q8TAF7 563 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 TRIM39Q9HCM9 518 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 CITO14578 2027 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 PLOD2O00469 737 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 HAT1O14929 419 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 SMIM18P0DKX4 95 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 ARNTP27540 789 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 GABARAPL2P60520 117 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 TARDBPQ13148 414 aaKnown RBP eCLIP16.62■□□□□ 0.251e-8■■■■■ 27.7
SMARCA4-215ENST00000590574 MAGED1Q9Y5V3 778 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 SCN9AQ15858 1988 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 DRGXA6NNA5 263 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 MITFO75030 526 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 KLK1P06870 262 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 C8AP07357 584 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 CTNNB1P35222 781 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 HMGCLP35914 325 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 PCBP2Q15366 365 aaKnown RBP eCLIP16.62■□□□□ 0.258e-6■■□□□ 13.7
SMARCA4-215ENST00000590574 AGTRAPQ6RW13 159 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 DPH2Q9BQC3 489 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 OSBPL10Q9BXB5 764 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 PRKAR1AP10644 381 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 IGFBP6P24592 240 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 NOGQ13253 232 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF404Q494X3 552 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 NETO1Q8TDF5 533 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 TRUB1Q8WWH5 349 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 GEMIN6Q8WXD5 167 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 MS4A4AQ96JQ5 239 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 PKP4Q99569 1192 aa16.62■□□□□ 0.25
SMARCA4-215ENST00000590574 COPZ1P61923 177 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 RPS13P62277 151 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 SP140Q13342 867 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 VMACQ2NL98 169 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 CLLU1OSQ5K130 101 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 C22orf39Q6P5X5 142 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF783Q6ZMS7 281 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 HS3ST5Q8IZT8 346 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 GPR78Q96P69 363 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 TRIB3Q96RU7 358 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 RETREG1Q9H6L5 497 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 MAGIXQ9H6Y5 334 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 POLE4Q9NR33 117 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 PDPK1O15530 556 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 ADH1CP00326 375 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 OR1E2P47887 323 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 TUBA1BP68363 451 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 ZSWIM7Q19AV6 140 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 TUBA1AQ71U36 451 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 MRPL48Q96GC5 212 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 GPC6Q9Y625 555 aaPredicted RBP16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF780BQ9Y6R6 833 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 TRBC2A0A5B9 178 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 IRGMA1A4Y4 181 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 AP1G1O43747 822 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 OR1F1O43749 312 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 MT-ND2P03891 347 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 CYP27C1Q4G0S4 372 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 KLHL12Q53G59 568 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 CRELD1Q96HD1 420 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 CCM2Q9BSQ5 444 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 VAPAQ9P0L0 249 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 B4GALT6Q9UBX8 382 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 PCDHB14Q9Y5E9 798 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 PRNPP04156 253 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 DSTNP60981 165 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 SRP54P61011 504 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 CDK6Q00534 326 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 HEPACAMQ14CZ8 416 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 TSTQ16762 297 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 VN1R5Q7Z5H4 357 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 GALNT10Q86SR1 603 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 PGBD5Q8N414 524 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 CYB5D2Q8WUJ1 264 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 PLAC1Q9HBJ0 212 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 USP22Q9UPT9 525 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 MRPS7Q9Y2R9 242 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 ISM1B1AKI9 464 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 C6orf47O95873 294 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 PCCBP05166 539 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 SLC6A4P31645 630 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 TIE1P35590 1138 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 PREPP48147 710 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 ADAM17P78536 824 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 PTPN18Q99952 460 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 GTF2A1LQ9UNN4 478 aa16.61■□□□□ 0.25
SMARCA4-215ENST00000590574 IL18Q14116 193 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms