RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 SPRTNQ9H040 489 aaPredicted RBP16.13■□□□□ 0.17
LSM14A-208ENST00000590416 IQCGQ9H095 443 aaKnown RBP16.13■□□□□ 0.17
LSM14A-208ENST00000590416 TMEM216Q9P0N5 145 aa16.13■□□□□ 0.17
LSM14A-208ENST00000590416 OPTCQ9UBM4 332 aa16.13■□□□□ 0.17
LSM14A-208ENST00000590416 DCDC2Q9UHG0 476 aa16.13■□□□□ 0.17
LSM14A-208ENST00000590416 TMCO1Q9UM00 188 aa16.13■□□□□ 0.17
LSM14A-208ENST00000590416 KLK4Q9Y5K2 254 aa16.13■□□□□ 0.17
LSM14A-208ENST00000590416 CTIFO43310 598 aaKnown RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 CPNE3O75131 537 aaKnown RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 NTRK1P04629 796 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 MSL3P1P0C860 447 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 MTHFD2P13995 350 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 ZNF28P17035 718 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 KRT4P19013 534 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 CCT5P48643 541 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 ALDH18A1P54886 795 aaKnown RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 MEF2AQ02078 507 aaPredicted RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 ZNF844Q08AG5 666 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 COL9A2Q14055 689 aaPredicted RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 SETDB1Q15047 1291 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 PDK4Q16654 411 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 CATSPEREQ5SY80 951 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 BEND6Q5SZJ8 279 aaPredicted RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 FRMPD2BQ6IN97 320 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 ZNF425Q6IV72 752 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 LCA5Q86VQ0 697 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 SRRM1Q8IYB3 904 aaKnown RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 TBC1D19Q8N5T2 526 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 ZNF655Q8N720 491 aaPredicted RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 PTGR2Q8N8N7 351 aaPredicted RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 ZNF248Q8NDW4 579 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 KCNE4Q8WWG9 221 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 CNTNAP3BQ96NU0 1288 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 CNTNAP3Q9BZ76 1288 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 ACTR5Q9H9F9 607 aaPredicted RBP16.12■□□□□ 0.17
LSM14A-208ENST00000590416 LGALS13Q9UHV8 139 aa16.12■□□□□ 0.17
LSM14A-208ENST00000590416 TEX51A0A1B0GUA7 166 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 FEZF1A0PJY2 475 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 ZSCAN9O15535 394 aaPredicted RBP16.11■□□□□ 0.17
LSM14A-208ENST00000590416 RRP8O43159 456 aaKnown RBP16.11■□□□□ 0.17
LSM14A-208ENST00000590416 ZNF749O43361 778 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 RAD1O60671 282 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 CTSBP07858 339 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 LIPCP11150 499 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 GNAZP19086 355 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 GGT5P36269 586 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 GABRA4P48169 554 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 ATP1A2P50993 1020 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 RPS15AP62244 130 aaKnown RBP16.11■□□□□ 0.17
LSM14A-208ENST00000590416 CSNK1G2P78368 415 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 TCTE1Q5JU00 501 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 FBXO42Q6P3S6 717 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 TLDC1Q6P9B6 456 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 NXPE4Q6UWF7 544 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 LRRC69Q6ZNQ3 347 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 KLHDC8AQ8IYD2 350 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 GALNT6Q8NCL4 622 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 SNIP1Q8TAD8 396 aaKnown RBP16.11■□□□□ 0.17
LSM14A-208ENST00000590416 UBTD2Q8WUN7 234 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 AIF1LQ9BQI0 150 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 TMEM109Q9BVC6 243 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 CAPS2Q9BXY5 557 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 PELI2Q9HAT8 420 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 STARD5Q9NSY2 213 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 TXLNGQ9NUQ3 528 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 RAXQ9Y2V3 346 aa16.11■□□□□ 0.17
LSM14A-208ENST00000590416 LOC105369274A0A096LPK9 316 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 LOC102723532A0A0G2JNH3 316 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 H0YGG7 62 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 K7EPI3 171 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 SRPX2O60687 465 aaPredicted RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 H2AFYO75367 372 aaKnown RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 HBQ1P09105 142 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 CCNYL3P0C7X3 344 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 EEF1DP29692 281 aaKnown RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 ARL1P40616 181 aaPredicted RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 ARF3P61204 181 aaPredicted RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 WASHC2DQ5SRD0 308 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 C6orf15Q6UXA7 325 aaPredicted RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 LRIG3Q6UXM1 1119 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 CROCCP2Q86T23 111 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 TRABD2AQ86V40 505 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 PROSER1Q86XN7 944 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 CACNA2D3Q8IZS8 1091 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 NLGN4XQ8N0W4 816 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 OR4N4Q8N0Y3 316 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 IL22RA1Q8N6P7 574 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 TEX9Q8N6V9 391 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 NLGN4YQ8NFZ3 816 aaPredicted RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 HNRNPLLQ8WVV9 542 aaKnown RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 SMC6Q96SB8 1091 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 NDC1Q9BTX1 674 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 GPRC5BQ9NZH0 403 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 NDOR1Q9UHB4 597 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 PILRAQ9UKJ1 303 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 GRID1Q9ULK0 1009 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 TMEM184BQ9Y519 407 aaPredicted RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 ASB1Q9Y576 335 aa16.1■□□□□ 0.17
LSM14A-208ENST00000590416 TNPO3Q9Y5L0 923 aaKnown RBP16.1■□□□□ 0.17
LSM14A-208ENST00000590416 AP1M2Q9Y6Q5 423 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms