RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 A0A0J9YY10 115 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 C4orf47A7E2U8 309 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 H0YIV9 168 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 H7BY64 318 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 HDAC3O15379 428 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 CHEK2O96017 543 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 KRT6AP02538 564 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 KRT6BP04259 564 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 TROVE2P10155 538 aaKnown RBP eCLIP14.58□□□□□ -0.08
DDX39A-211ENST00000590239 CD22P20273 847 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 VARSP26640 1264 aaKnown RBP14.58□□□□□ -0.08
DDX39A-211ENST00000590239 HMOX2P30519 316 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 GRIA3P42263 894 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 KRT6CP48668 564 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 YBX1P67809 324 aaKnown RBP14.58□□□□□ -0.08
DDX39A-211ENST00000590239 CSNK1G2P78368 415 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 RELAQ04206 551 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 ZNF33BQ06732 778 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 HIST2H2ACQ16777 129 aaPredicted RBP14.58□□□□□ -0.08
DDX39A-211ENST00000590239 UGT3A2Q3SY77 523 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 PERM1Q5SV97 790 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 CLEC6AQ6EIG7 209 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 HIST2H2AA3Q6FI13 130 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 ZNF425Q6IV72 752 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 RNF165Q6ZSG1 346 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 PLXDC1Q8IUK5 500 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 KRT78Q8N1N4 520 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 DCBLD1Q8N8Z6 715 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 IFI44Q8TCB0 444 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 NCSTNQ92542 709 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 ZUFSPQ96AP4 578 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 REPS1Q96D71 796 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 PRAP1Q96NZ9 151 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 KCNA7Q96RP8 456 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 CDC6Q99741 560 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 CCT7Q99832 543 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 DPYSL5Q9BPU6 564 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 CCDC3Q9BQI4 270 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 PLCD4Q9BRC7 762 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 SIKE1Q9BRV8 207 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 TRIM55Q9BYV6 548 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 ABCG4Q9H172 646 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 SEMA6CQ9H3T2 930 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 PFDN4Q9NQP4 134 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 CUEDC1Q9NWM3 386 aaPredicted RBP14.58□□□□□ -0.08
DDX39A-211ENST00000590239 PSD3Q9NYI0 1048 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 MARCOQ9UEW3 520 aaPredicted RBP14.58□□□□□ -0.08
DDX39A-211ENST00000590239 SNX6Q9UNH7 406 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 TSC22D4Q9Y3Q8 395 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 PCDHGA11Q9Y5H2 935 aa14.58□□□□□ -0.08
DDX39A-211ENST00000590239 TRBC2A0A5B9 178 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 OR2A25A4D2G3 310 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 TMEM233B4DJY2 109 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 MANBAO00462 879 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 CAPN5O15484 640 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-211ENST00000590239 SH3BP5O60239 455 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 CBFA2T3O75081 653 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 FAM107AO95990 144 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 GP1BAP07359 652 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 KITP10721 976 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 ALOX15P16050 662 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-211ENST00000590239 ACP1P24666 158 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 GRK3P35626 688 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 PPM1FP49593 454 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-211ENST00000590239 FOXA1P55317 472 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 REEP5Q00765 189 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 SLBPQ14493 270 aaKnown RBP eCLIP14.57□□□□□ -0.08
DDX39A-211ENST00000590239 ZRSR2Q15696 482 aaKnown RBP14.57□□□□□ -0.08
DDX39A-211ENST00000590239 CPSF6Q16630 551 aaKnown RBP eCLIP14.57□□□□□ -0.08
DDX39A-211ENST00000590239 AMZ1Q400G9 498 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 NKAIN2Q5VXU1 208 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 FRG2Q64ET8 278 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 IRGCQ6NXR0 463 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 MED27Q6P2C8 311 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 TRIM73Q86UV7 250 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 FAM20CQ8IXL6 584 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 LAS2Q8IYD9 372 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 TBC1D19Q8N5T2 526 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 BAHD1Q8TBE0 780 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-211ENST00000590239 FRG2BQ96QU4 278 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 C1GALT1Q9NS00 363 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 TIMM22Q9Y584 194 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 DNAJC15Q9Y5T4 150 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 USH1CQ9Y6N9 552 aa14.57□□□□□ -0.08
DDX39A-211ENST00000590239 MN1Q10571 1320 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-211ENST00000590239 TLCD2A6NGC4 264 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 TRPC5OSA6NMA1 111 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 ULK1O75385 1050 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 C9P02748 559 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 EZRP15311 586 aaKnown RBP14.56□□□□□ -0.08
DDX39A-211ENST00000590239 CDH3P22223 829 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 SERPINB1P30740 379 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 LSSP48449 732 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 LIMK1P53667 647 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 PPP1CAP62136 330 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 CCL7P80098 99 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 CBX1P83916 185 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 IFT88Q13099 833 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 STPG1Q5TH74 334 aa14.56□□□□□ -0.08
DDX39A-211ENST00000590239 CGB2Q6NT52 195 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms