RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	NLGN4X	Q8N0W4	816 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	IL22RA1	Q8N6P7	574 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	NEIL2	Q969S2	332 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	CLIP3	Q96DZ5	547 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	ZFYVE21	Q9BQ24	234 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	SELENOS	Q9BQE4	189 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	HAUS8	Q9BT25	410 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	SLC7A5P2	Q9GIP4	190 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	ANKMY1	Q9P2S6	941 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	PTBP2	Q9UKA9	531 aa	Known RBP	11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	ASB1	Q9Y576	335 aa		11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	MDC1	Q14676	2089 aa	Known RBP	11.42	□□□□□ -0.58
RFX2-215	ENST00000589742	LOC101059948	A0A1B0GTJ6	334 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	LCMT2	O60294	686 aa	Known RBP	11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	CCNT2	O60583	730 aa	Known RBP	11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	NUDT17	P0C025	328 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	COL6A2	P12110	1019 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	KRT15	P19012	456 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	SLC6A12	P48065	614 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	IFFO1	Q0D2I5	559 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	GPS2	Q13227	327 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	NAA25	Q14CX7	972 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	CDKL4	Q5MAI5	379 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	C1orf189	Q5VU69	101 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	LCN10	Q6JVE6	187 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	C16orf46	Q6P387	395 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	TLDC1	Q6P9B6	456 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	C19orf48	Q6RUI8	117 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	TMPRSS11B	Q86T26	416 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	TDRP	Q86YL5	185 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	TCAIM	Q8N3R3	496 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	PDPR	Q8NCN5	879 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	RHEBL1	Q8TAI7	183 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	SLC5A11	Q8WWX8	675 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	OR2A5	Q96R48	311 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	DPH1	Q9BZG8	443 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	NUDT4	Q9NZJ9	180 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	TMEM216	Q9P0N5	145 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	CPSF2	Q9P2I0	782 aa	Known RBP	11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	XPR1	Q9UBH6	696 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	DHCR7	Q9UBM7	475 aa	Known RBP	11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	PLAA	Q9Y263	795 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	DYRK1B	Q9Y463	629 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	PCDHB3	Q9Y5E6	796 aa		11.41	□□□□□ -0.58
RFX2-215	ENST00000589742	CACNA1B	Q00975	2339 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742		A0A087WV48	116 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	LRRC14B	A6NHZ5	514 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	SYCE1L	A8MT33	242 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	ZSCAN9	O15535	394 aa	Predicted RBP	11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	EFS	O43281	561 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	SRPX2	O60687	465 aa	Predicted RBP	11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	CPNE3	O75131	537 aa	Known RBP	11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	STK16	O75716	305 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	MED26	O95402	600 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	TUBB	P07437	444 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	RBP1	P09455	135 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	CCNYL3	P0C7X3	344 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	GFAP	P14136	432 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	WT1	P19544	449 aa	Predicted RBP	11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	ALAS2	P22557	587 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	F8A1	P23610	371 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	HRH2	P25021	359 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	VARS	P26640	1264 aa	Known RBP	11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	GGT5	P36269	586 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	ATP1A2	P50993	1020 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	CCR8	P51685	355 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	TLE3	Q04726	772 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	PFKFB4	Q16877	469 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	TSNAXIP1	Q2TAA8	658 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	MANEA	Q5SRI9	462 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	NXPE4	Q6UWF7	544 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	KLHDC8A	Q8IYD2	350 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	MREG	Q8N565	214 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	DTWD1	Q8N5C7	304 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	ESX1	Q8N693	406 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	SNX31	Q8N9S9	440 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	ZNF740	Q8NDX6	193 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	ABHD11	Q8NFV4	315 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	MR1	Q95460	341 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	CRELD1	Q96HD1	420 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	CABS1	Q96KC9	395 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	ZNF285	Q96NJ3	590 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	RUFY1	Q96T51	708 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	MACROD1	Q9BQ69	325 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	CD244	Q9BZW8	370 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	SPNS1	Q9H2V7	528 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	LHX9	Q9NQ69	397 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	DNAJC11	Q9NVH1	559 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	PADI1	Q9ULC6	663 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	KCNE2	Q9Y6J6	123 aa		11.4	□□□□□ -0.58
RFX2-215	ENST00000589742	TK2	O00142	265 aa		11.39	□□□□□ -0.59
RFX2-215	ENST00000589742	MEN1	O00255	615 aa		11.39	□□□□□ -0.59
RFX2-215	ENST00000589742	P2RX6	O15547	441 aa		11.39	□□□□□ -0.59
RFX2-215	ENST00000589742	OR1F1	O43749	312 aa		11.39	□□□□□ -0.59
RFX2-215	ENST00000589742	PRAMEF4	O60810	478 aa		11.39	□□□□□ -0.59
RFX2-215	ENST00000589742	CDH16	O75309	829 aa		11.39	□□□□□ -0.59
RFX2-215	ENST00000589742	SIX3	O95343	332 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms