RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 PRAMEF13Q5VWM6 474 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 ADCK2Q7Z695 626 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 SLC26A11Q86WA9 606 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 ANKMY2Q8IV38 441 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 SPATA4Q8NEY3 305 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-208ENST00000588692 COL26A1Q96A83 441 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 HIST1H2AHQ96KK5 128 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 C10orf90Q96M02 699 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 SMAD5Q99717 465 aaKnown RBP13.78□□□□□ -0.2
DDX39A-208ENST00000588692 HIST1H2AJQ99878 128 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 ERP44Q9BS26 406 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 H2AFJQ9BTM1 129 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 NUDT9Q9BW91 350 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 SEMA3GQ9NS98 782 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 ABCF3Q9NUQ8 709 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 NSMCE4AQ9NXX6 385 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 WHRNQ9P202 907 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 C5AR2Q9P296 337 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 CTSFQ9UBX1 484 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 ZNF282Q9UDV7 671 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-208ENST00000588692 CDC23Q9UJX2 597 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 VWA7Q9Y334 891 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 SNX24Q9Y343 169 aa13.78□□□□□ -0.2
DDX39A-208ENST00000588692 ASH1LQ9NR48 2969 aaKnown RBP13.77□□□□□ -0.2
DDX39A-208ENST00000588692 HAT1O14929 419 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 MED26O95402 600 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 ALPPP05187 535 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 ENO2P09104 434 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-208ENST00000588692 FBLP22087 321 aaKnown RBP13.77□□□□□ -0.21
DDX39A-208ENST00000588692 CASQ1P31415 396 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 ETF1P62495 437 aaKnown RBP13.77□□□□□ -0.21
DDX39A-208ENST00000588692 OCA2Q04671 838 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 DSG2Q14126 1118 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 MYBPC3Q14896 1274 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 VWA5B1Q5TIE3 1220 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 AGTRAPQ6RW13 159 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 SPNS2Q8IVW8 549 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 ZBED8Q8IZ13 594 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 GALNT16Q8N428 558 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 METTL27Q8N6F8 245 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-208ENST00000588692 TRIM54Q9BYV2 358 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 TMEM184CQ9NVA4 438 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 CUEDC1Q9NWM3 386 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-208ENST00000588692 MOCS1Q9NZB8 636 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 RUVBL1Q9Y265 456 aaKnown RBP13.77□□□□□ -0.21
DDX39A-208ENST00000588692 MAU2Q9Y6X3 613 aa13.77□□□□□ -0.21
DDX39A-208ENST00000588692 IGLV3-12A0A075B6K2 115 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 A6NL46 340 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 H7BY64 318 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 IPO13O94829 963 aaKnown RBP13.76□□□□□ -0.21
DDX39A-208ENST00000588692 FOXL2P58012 376 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 RPS15AP62244 130 aaKnown RBP13.76□□□□□ -0.21
DDX39A-208ENST00000588692 FASTKD3Q14CZ7 662 aaKnown RBP13.76□□□□□ -0.21
DDX39A-208ENST00000588692 PHKG1Q16816 387 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 HKDC1Q2TB90 917 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 LCTLQ6UWM7 567 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 STT3BQ8TCJ2 826 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 ATL1Q8WXF7 558 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 MIEF2Q96C03 454 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 THAP11Q96EK4 314 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 PDLIM5Q96HC4 596 aaKnown RBP13.76□□□□□ -0.21
DDX39A-208ENST00000588692 PRAP1Q96NZ9 151 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 OLFM1Q99784 485 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 SGPP1Q9BX95 441 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 SOX17Q9H6I2 414 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-208ENST00000588692 ATP13A2Q9NQ11 1180 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 HS3ST3B1Q9Y662 390 aa13.76□□□□□ -0.21
DDX39A-208ENST00000588692 KCNE1BA0A087WTH5 132 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 SOCS6O14544 535 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 EIF3HO15372 352 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX39A-208ENST00000588692 ZIC2O95409 532 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-208ENST00000588692 ZNF37AP17032 561 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-208ENST00000588692 AIMP2Q13155 320 aaKnown RBP13.75□□□□□ -0.21
DDX39A-208ENST00000588692 FAM53BQ14153 422 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 RBBP7Q16576 425 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 NDUFA9Q16795 377 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 DUPD1Q68J44 220 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 CAPN13Q6MZZ7 669 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-208ENST00000588692 STRA8Q7Z7C7 330 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 ZC3HC1Q86WB0 502 aaKnown RBP13.75□□□□□ -0.21
DDX39A-208ENST00000588692 C17orf64Q86WR6 236 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 ARHGEF39Q8N4T4 335 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 DTWD1Q8N5C7 304 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 PYROXD1Q8WU10 500 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 ANKRD7Q92527 254 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 HAUS8Q9BT25 410 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 CRB3Q9BUF7 120 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 FAM129AQ9BZQ8 928 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 PHACTR1Q9C0D0 580 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 DRC3Q9H069 523 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 ATG10Q9H0Y0 220 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 SYNPO2LQ9H987 977 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 C14orf105Q9NVL8 296 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 ARL15Q9NXU5 204 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 FBXL4Q9UKA2 621 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 PSAT1Q9Y617 370 aa13.75□□□□□ -0.21
DDX39A-208ENST00000588692 FAM95CA0A1B0GW59 222 aa13.74□□□□□ -0.21
DDX39A-208ENST00000588692 RAD51CO43502 376 aa13.74□□□□□ -0.21
DDX39A-208ENST00000588692 SORBS2O94875 1100 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms