RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 KLHL41O60662 606 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 SAT1P21673 171 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 MMP11P24347 488 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 CCND1P24385 295 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 C2orf54Q08AI8 447 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 NAE1Q13564 534 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 RAPSNQ13702 412 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 FASTKD3Q14CZ7 662 aaKnown RBP18.65■□□□□ 0.58
TPM4-208ENST00000588410 SHISA6Q6ZSJ9 500 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 STRA8Q7Z7C7 330 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 HPS6Q86YV9 775 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 PYROXD1Q8WU10 500 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 VPS50Q96JG6 964 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 C10orf90Q96M02 699 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 OR2A5Q96R48 311 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 SPSB2Q99619 263 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 NUDT9Q9BW91 350 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 YIPF2Q9BWQ6 316 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 ATG10Q9H0Y0 220 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 ATP13A2Q9NQ11 1180 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 TMEM184CQ9NVA4 438 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 ARL15Q9NXU5 204 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 NSMCE4AQ9NXX6 385 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 WHRNQ9P202 907 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 ZNF282Q9UDV7 671 aaPredicted RBP18.65■□□□□ 0.58
TPM4-208ENST00000588410 RUVBL1Q9Y265 456 aaKnown RBP18.65■□□□□ 0.58
TPM4-208ENST00000588410 TLN1Q9Y490 2541 aaKnown RBP18.65■□□□□ 0.58
TPM4-208ENST00000588410 AGPSO00116 658 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 TP73O15350 636 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 RAD51CO43502 376 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 DPM1O60762 260 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 MED26O95402 600 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 ANXA5P08758 320 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 RBBP7Q16576 425 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 NDUFA9Q16795 377 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 HKDC1Q2TB90 917 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 GARNL3Q5VVW2 1013 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 CAPN13Q6MZZ7 669 aaPredicted RBP18.64■□□□□ 0.57
TPM4-208ENST00000588410 MBOAT1Q6ZNC8 495 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 CAPN12Q6ZSI9 719 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 SLC26A11Q86WA9 606 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 C17orf64Q86WR6 236 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 PLD3Q8IV08 490 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 GALNT16Q8N428 558 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 DTWD1Q8N5C7 304 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 MIEF2Q96C03 454 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 OLFM1Q99784 485 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 CRB3Q9BUF7 120 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 SEMA3GQ9NS98 782 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 MOCS1Q9NZB8 636 aa18.64■□□□□ 0.57
TPM4-208ENST00000588410 UTP11Q9Y3A2 253 aaKnown RBP18.64■□□□□ 0.57
TPM4-208ENST00000588410 VSTM2BA6NLU5 285 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 TSPAN12O95859 305 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 ALPPP05187 535 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 AP1S2P56377 157 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 RPS15AP62244 130 aaKnown RBP18.63■□□□□ 0.57
TPM4-208ENST00000588410 PHKG1Q16816 387 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 VWA5B1Q5TIE3 1220 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 PRSS58Q8IYP2 241 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 STT3BQ8TCJ2 826 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 ATL1Q8WXF7 558 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 MVB12AQ96EY5 273 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 VPS39Q96JC1 886 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 SAYSD1Q9NPB0 183 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 FBXL4Q9UKA2 621 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 PSAT1Q9Y617 370 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 BOD1L1Q8NFC6 3051 aa18.63■□□□□ 0.57
TPM4-208ENST00000588410 HELZ2Q9BYK8 2649 aaKnown RBP18.62■□□□□ 0.57
TPM4-208ENST00000588410 FAM95CA0A1B0GW59 222 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 TTLL8A6PVC2 850 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 EIF3HO15372 352 aaKnown RBP eCLIP18.62■□□□□ 0.57
TPM4-208ENST00000588410 ENO2P09104 434 aaPredicted RBP18.62■□□□□ 0.57
TPM4-208ENST00000588410 ZGLP1P0C6A0 271 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 GRK3P35626 688 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 PGGT1BP53609 377 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 SLC12A2P55011 1212 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 FOXK1P85037 733 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 ILF2Q12905 390 aaKnown RBP18.62■□□□□ 0.57
TPM4-208ENST00000588410 AIMP2Q13155 320 aaKnown RBP18.62■□□□□ 0.57
TPM4-208ENST00000588410 DSG2Q14126 1118 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 IGFBP7Q16270 282 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 NADK2Q4G0N4 442 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 IRAK1BP1Q5VVH5 260 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 DUPD1Q68J44 220 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 LCTLQ6UWM7 567 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 ZC3HC1Q86WB0 502 aaKnown RBP18.62■□□□□ 0.57
TPM4-208ENST00000588410 TMEM151BQ8IW70 566 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 NKAPQ8N5F7 415 aaKnown RBP18.62■□□□□ 0.57
TPM4-208ENST00000588410 CDKL2Q92772 493 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 THAP11Q96EK4 314 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 MMABQ96EY8 250 aaPredicted RBP18.62■□□□□ 0.57
TPM4-208ENST00000588410 SMAD5Q99717 465 aaKnown RBP18.62■□□□□ 0.57
TPM4-208ENST00000588410 HAUS8Q9BT25 410 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 DRC3Q9H069 523 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 C5AR2Q9P296 337 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 TXNDC16Q9P2K2 825 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 TRPC4Q9UBN4 977 aa18.62■□□□□ 0.57
TPM4-208ENST00000588410 ITGA3P26006 1051 aa18.61■□□□□ 0.57
TPM4-208ENST00000588410 MLLT10P55197 1068 aa18.61■□□□□ 0.57
TPM4-208ENST00000588410 KLC1Q07866 573 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms