RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 IGLV3-12A0A075B6K2 115 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 ZNF839A8K0R7 811 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 GFYI3L273 518 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 PGRMC1O00264 195 aaKnown RBP13.64□□□□□ -0.23
VMP1-206ENST00000587945 MAP2K7O14733 419 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 HAT1O14929 419 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 KLHL18O94889 574 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 CCNDBP1O95273 360 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 HPP00738 406 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 MPC1LP0DKB6 136 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 EMP2P54851 167 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 EEF1A2Q05639 463 aaKnown RBP13.64□□□□□ -0.23
VMP1-206ENST00000587945 DSG2Q14126 1118 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 SYT16Q17RD7 645 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 THEMIS2Q5TEJ8 643 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 FAAH2Q6GMR7 532 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 LRRC56Q8IYG6 542 aaPredicted RBP13.64□□□□□ -0.23
VMP1-206ENST00000587945 ARHGEF39Q8N4T4 335 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 AMER3Q8N944 861 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 FBXO15Q8NCQ5 510 aaPredicted RBP13.64□□□□□ -0.23
VMP1-206ENST00000587945 CATSPER1Q8NEC5 780 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 PPP4R1Q8TF05 950 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 RERGQ96A58 199 aaPredicted RBP13.64□□□□□ -0.23
VMP1-206ENST00000587945 MMABQ96EY8 250 aaPredicted RBP13.64□□□□□ -0.23
VMP1-206ENST00000587945 VPS50Q96JG6 964 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 BARD1Q99728 777 aaKnown RBP13.64□□□□□ -0.23
VMP1-206ENST00000587945 AARSD1Q9BTE6 412 aaKnown RBP13.64□□□□□ -0.23
VMP1-206ENST00000587945 IARS2Q9NSE4 1012 aaKnown RBP13.64□□□□□ -0.23
VMP1-206ENST00000587945 CDC14AQ9UNH5 594 aa13.64□□□□□ -0.23
VMP1-206ENST00000587945 ESPL1Q14674 2120 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 CCDC88CQ9P219 2028 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 A0A0A6YYC8 382 aaPredicted RBP13.63□□□□□ -0.23
VMP1-206ENST00000587945 IDSB3KWA1 339 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 H7BY64 318 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 I3L1I5 382 aaPredicted RBP13.63□□□□□ -0.23
VMP1-206ENST00000587945 FOXS1O43638 330 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 ZBTB14O43829 449 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 NRDCO43847 1150 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 PHF2O75151 1096 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 BANF1O75531 89 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 COX6A1P12074 109 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 ENO3P13929 434 aaPredicted RBP13.63□□□□□ -0.23
VMP1-206ENST00000587945 EZRP15311 586 aaKnown RBP13.63□□□□□ -0.23
VMP1-206ENST00000587945 IMPA1P29218 277 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 SLC26A3P40879 764 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 EMP3P54852 163 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 MAT1AQ00266 395 aaKnown RBP13.63□□□□□ -0.23
VMP1-206ENST00000587945 TIAL1Q01085 375 aaKnown RBP eCLIP13.63□□□□□ -0.23
VMP1-206ENST00000587945 ISLR2Q6UXK2 745 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 UBE2R2Q712K3 238 aaPredicted RBP13.63□□□□□ -0.23
VMP1-206ENST00000587945 SHISA5Q8N114 240 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 PIAS4Q8N2W9 510 aaPredicted RBP13.63□□□□□ -0.23
VMP1-206ENST00000587945 SLC35F6Q8N357 371 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
VMP1-206ENST00000587945 PRAP1Q96NZ9 151 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 OSBPL9Q96SU4 736 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 NDNQ99608 321 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 EPS8L2Q9H6S3 715 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 UTP6Q9NYH9 597 aaKnown RBP13.63□□□□□ -0.23
VMP1-206ENST00000587945 ADAMTS6Q9UKP5 1117 aa13.63□□□□□ -0.23
VMP1-206ENST00000587945 MRPS2Q9Y399 296 aaKnown RBP13.63□□□□□ -0.23
VMP1-206ENST00000587945 ICE1Q9Y2F5 2266 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 UTP20O75691 2785 aaKnown RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 NSG1A0A0A6YYJ2 146 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 DDAH2O95865 285 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 HEXBP07686 556 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 CELA2AP08217 269 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 ANXA5P08758 320 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 COL8A1P27658 744 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 SKIV2L2P42285 1042 aaKnown RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 EFNA3P52797 238 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 ABATP80404 500 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 CDC16Q13042 620 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 MFAP5Q13361 173 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 ELOAQ14241 798 aaKnown RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 ZNF169Q14929 603 aaPredicted RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 RNASEH2BQ5TBB1 312 aaKnown RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 GARNL3Q5VVW2 1013 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 MBOAT1Q6ZNC8 495 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 NDUFAF7Q7L592 441 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 KCNMB4Q86W47 210 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 ZC3H7AQ8IWR0 971 aaKnown RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 PPIL6Q8IXY8 311 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 KBTBD2Q8IY47 623 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 CALML6Q8TD86 181 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 BRIX1Q8TDN6 353 aaKnown RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 GRHL3Q8TE85 626 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 MVB12AQ96EY5 273 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 NAP1L3Q99457 506 aaPredicted RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 MACROD1Q9BQ69 325 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 DRC3Q9H069 523 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 PLA2G3Q9NZ20 509 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 PTGFRNQ9P2B2 879 aa13.62□□□□□ -0.23
VMP1-206ENST00000587945 TRMT6Q9UJA5 497 aaKnown RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 PRRC2CQ9Y520 2896 aaKnown RBP13.62□□□□□ -0.23
VMP1-206ENST00000587945 SPTBN1Q01082 2364 aaKnown RBP13.61□□□□□ -0.23
VMP1-206ENST00000587945 PRPF4O43172 522 aaKnown RBP eCLIP13.61□□□□□ -0.23
VMP1-206ENST00000587945 LDLRP01130 860 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 PRR35P0CG20 571 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 CXCR2P25025 360 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms