RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 SLC26A11Q86WA9 606 aa18.17■□□□□ 0.5
TPM4-204ENST00000586499 CSNK1A1LQ8N752 337 aa18.17■□□□□ 0.5
TPM4-204ENST00000586499 SLC25A23Q9BV35 468 aa18.17■□□□□ 0.5
TPM4-204ENST00000586499 RUVBL1Q9Y265 456 aaKnown RBP18.17■□□□□ 0.5
TPM4-204ENST00000586499 ANKRD12Q6UB98 2062 aa18.17■□□□□ 0.5
TPM4-204ENST00000586499 P2RX6O15547 441 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 URI1O94763 535 aaPredicted RBP18.16■□□□□ 0.5
TPM4-204ENST00000586499 CD63P08962 238 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 HIST1H2AGP0C0S8 130 aaPredicted RBP18.16■□□□□ 0.5
TPM4-204ENST00000586499 PIM1P11309 404 aaPredicted RBP18.16■□□□□ 0.5
TPM4-204ENST00000586499 EZRP15311 586 aaKnown RBP18.16■□□□□ 0.5
TPM4-204ENST00000586499 HIST1H2ADP20671 130 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 TAS2R39P59534 338 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 SNRPNP63162 240 aaKnown RBP18.16■□□□□ 0.5
TPM4-204ENST00000586499 PPP1R32Q7Z5V6 425 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 CCDC25Q86WR0 208 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 CEP97Q8IW35 865 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 FDCSPQ8NFU4 85 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 FBXO25Q8TCJ0 367 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 COL26A1Q96A83 441 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 FKBP10Q96AY3 582 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 PYCR2Q96C36 320 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 CABS1Q96KC9 395 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 HIST1H2AHQ96KK5 128 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 SPSB2Q99619 263 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 HIST1H2AJQ99878 128 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 MCMBPQ9BTE3 642 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 H2AFJQ9BTM1 129 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 RAB17Q9H0T7 212 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 EPN3Q9H201 632 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 SOX17Q9H6I2 414 aaPredicted RBP18.16■□□□□ 0.5
TPM4-204ENST00000586499 ZNF304Q9HCX3 659 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 ARL15Q9NXU5 204 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 UTP6Q9NYH9 597 aaKnown RBP18.16■□□□□ 0.5
TPM4-204ENST00000586499 CDC23Q9UJX2 597 aa18.16■□□□□ 0.5
TPM4-204ENST00000586499 MDC1Q14676 2089 aaKnown RBP18.15■□□□□ 0.5
TPM4-204ENST00000586499 CDC7O00311 574 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 EIF3HO15372 352 aaKnown RBP eCLIP18.15■□□□□ 0.5
TPM4-204ENST00000586499 GUCA1CO95843 209 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 ALBP02768 609 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 NPPBP16860 134 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 ZNF37AP17032 561 aaPredicted RBP18.15■□□□□ 0.5
TPM4-204ENST00000586499 GPX6P59796 221 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 TLE1Q04724 770 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 RAPSNQ13702 412 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 MUM1Q2TAK8 710 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 SBSNQ6UWP8 590 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 C3orf62Q6ZUJ4 267 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 MED25Q71SY5 747 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 TMEM102Q8N9M5 508 aaPredicted RBP18.15■□□□□ 0.5
TPM4-204ENST00000586499 ANKRD49Q8WVL7 239 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 RERGQ96A58 199 aaPredicted RBP18.15■□□□□ 0.5
TPM4-204ENST00000586499 PDLIM5Q96HC4 596 aaKnown RBP18.15■□□□□ 0.5
TPM4-204ENST00000586499 VPS39Q96JC1 886 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 LRRC1Q9BTT6 524 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 SGPP1Q9BX95 441 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 SLC26A1Q9H2B4 701 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 RHOJQ9H4E5 214 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 MLXIPLQ9NP71 852 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 TMEM184CQ9NVA4 438 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 P4HTMQ9NXG6 502 aa18.15■□□□□ 0.5
TPM4-204ENST00000586499 MTO1Q9Y2Z2 717 aaKnown RBP18.15■□□□□ 0.5
TPM4-204ENST00000586499 TCRBV9S1A1TA0A576 114 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 ESYT3A0FGR9 886 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 FEZF1A0PJY2 475 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 FFAR3O14843 346 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 GPR42O15529 346 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 CEACAM4O75871 244 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 C1QAP02745 245 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 RRADP55042 308 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 CSNK1G2P78368 415 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 RELAQ04206 551 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 KLRB1Q12918 225 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 PRSS58Q8IYP2 241 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 ARHGEF39Q8N4T4 335 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 TEX19Q8NA77 164 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 ZNF592Q92610 1267 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 MACROD1Q9BQ69 325 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 MESP1Q9BRJ9 268 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 NUDT9Q9BW91 350 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 UNKQ9C0B0 810 aaKnown RBP18.14■□□□□ 0.49
TPM4-204ENST00000586499 PCBD2Q9H0N5 130 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 WDR54Q9H977 334 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 CAB39LQ9H9S4 337 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 NSMCE4AQ9NXX6 385 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 ANAPC2Q9UJX6 822 aa18.14■□□□□ 0.49
TPM4-204ENST00000586499 MRPS2Q9Y399 296 aaKnown RBP18.14■□□□□ 0.49
TPM4-204ENST00000586499 PCDHGA9Q9Y5G4 932 aaKnown RBP18.14■□□□□ 0.49
TPM4-204ENST00000586499 NPEPPSL1A6NEC2 478 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 VSTM2BA6NLU5 285 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 PEX12O00623 359 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 LCMT2O60294 686 aaKnown RBP18.13■□□□□ 0.49
TPM4-204ENST00000586499 CDH1P12830 882 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 CASRP41180 1078 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 MAGEA4P43358 317 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 PGDP52209 483 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 AP1S2P56377 157 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 CKAP4Q07065 602 aaKnown RBP18.13■□□□□ 0.49
TPM4-204ENST00000586499 PPP1R3AQ16821 1122 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 VWA2Q5GFL6 755 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms