RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ARHGAP19Q14CB8 494 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 CYP2A13Q16696 494 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 PIGGQ5H8A4 983 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 CATSPEREQ5SY80 951 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 TMPRSS11BQ86T26 416 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 PIGKQ92643 395 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 C12orf66Q96MD2 445 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 OR2M4Q96R27 311 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 EIF3LQ9Y262 564 aaKnown RBP19.72■□□□□ 0.75
ATG4D-204ENST00000586417 DYRK1BQ9Y463 629 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 GPR179Q6PRD1 2367 aa19.72■□□□□ 0.75
ATG4D-204ENST00000586417 A0A1W2PP18 115 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 CFLARO15519 480 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 JAK1P23458 1154 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 AFF3P51826 1226 aaKnown RBP19.71■□□□□ 0.75
ATG4D-204ENST00000586417 POLR2JP52435 117 aaKnown RBP19.71■□□□□ 0.75
ATG4D-204ENST00000586417 SRP54P61011 504 aaKnown RBP19.71■□□□□ 0.75
ATG4D-204ENST00000586417 CSTF3Q12996 717 aaKnown RBP19.71■□□□□ 0.75
ATG4D-204ENST00000586417 TSTA3Q13630 321 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-204ENST00000586417 CEACAM7Q14002 265 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 CLCA4Q14CN2 919 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 C1orf146Q5VVC0 180 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 ATG9BQ674R7 924 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 IQCHQ86VS3 1027 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 SETD7Q8WTS6 366 aaKnown RBP19.71■□□□□ 0.75
ATG4D-204ENST00000586417 ROPN1LQ96C74 230 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 CMTM7Q96FZ5 175 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 TCEAL2Q9H3H9 227 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-204ENST00000586417 SPATA7Q9P0W8 599 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 PACSIN3Q9UKS6 424 aa19.71■□□□□ 0.75
ATG4D-204ENST00000586417 ANGPT2O15123 496 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 IDSP22304 550 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 CCND1P24385 295 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 KCNK10P57789 538 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 PTGR1Q14914 329 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 ZNF423Q2M1K9 1284 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 PRAMEF14Q5SWL7 426 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 PRAMEF13Q5VWM6 474 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 LCTLQ6UWM7 567 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 HID1Q8IV36 788 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 PCYOX1LQ8NBM8 494 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 OR7G3Q8NG95 312 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 FAM174AQ8TBP5 190 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 SLC5A11Q8WWX8 675 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 VPS33AQ96AX1 596 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 CCDC124Q96CT7 223 aaKnown RBP19.7■□□□□ 0.74
ATG4D-204ENST00000586417 EHD1Q9H4M9 534 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 RNPEPL1Q9HAU8 725 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 POMPQ9Y244 141 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 A0A1B0GVT2 93 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 FXYD1O00168 92 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 TNFRSF10CO14798 259 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 VILLO15195 856 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 C1GALT1C1LP0DN25 315 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 HSD17B2P37059 387 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 TLR1Q15399 786 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 UAP1L1Q3KQV9 507 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 ADNP2Q6IQ32 1131 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 LIX1Q8N485 282 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 APIPQ96GX9 242 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 FCRL1Q96LA6 429 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 SERPINI1Q99574 410 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 GPATCH1Q9BRR8 931 aaKnown RBP19.7■□□□□ 0.74
ATG4D-204ENST00000586417 PRDM8Q9NQV8 689 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 NKX1-2Q9UD57 310 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-204ENST00000586417 DLGAP4Q9Y2H0 992 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 PCDHGA11Q9Y5H2 935 aa19.7■□□□□ 0.74
ATG4D-204ENST00000586417 TMEM131Q92545 1883 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 EEDO75530 441 aaKnown RBP19.69■□□□□ 0.74
ATG4D-204ENST00000586417 BCKDHAP12694 445 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 NXPH1P58417 271 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 TCF15Q12870 199 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 C6orf163Q5TEZ5 329 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 CACHD1Q5VU97 1274 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 NXPE4Q6UWF7 544 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 SYT12Q8IV01 421 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 C2orf73Q8N5S3 287 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-204ENST00000586417 ENDOVQ8N8Q3 282 aaKnown RBP19.69■□□□□ 0.74
ATG4D-204ENST00000586417 PRSS33Q8NF86 280 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 CCL4L1Q8NHW4 92 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 NUDT8Q8WV74 236 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 FERD3LQ96RJ6 166 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 MTERF1Q99551 399 aaKnown RBP19.69■□□□□ 0.74
ATG4D-204ENST00000586417 EFCAB11Q9BUY7 163 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 TMEM168Q9H0V1 697 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 IMP3Q9NV31 184 aaKnown RBP19.69■□□□□ 0.74
ATG4D-204ENST00000586417 GEMIN8Q9NWZ8 242 aaKnown RBP19.69■□□□□ 0.74
ATG4D-204ENST00000586417 CROTQ9UKG9 612 aa19.69■□□□□ 0.74
ATG4D-204ENST00000586417 A0A1B0GTW7 788 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 CCDC154A6NI56 674 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 OR52A4PA6NMU1 304 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 PDZK1P1A8MUH7 402 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 HSD3B1P14060 373 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 ACPPP15309 386 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 AMD1P17707 334 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 HSD3B2P26439 372 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 CTBSQ01459 385 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 BNC1Q01954 994 aa19.68■□□□□ 0.74
ATG4D-204ENST00000586417 SLBPQ14493 270 aaKnown RBP eCLIP19.68■□□□□ 0.74
ATG4D-204ENST00000586417 TIGD2Q4W5G0 525 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms