RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 XRCC1P18887 633 aaPredicted RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 ZNF10P21506 573 aaPredicted RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 HPCAL1P37235 193 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 PIK3CBP42338 1070 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 GSTM5P46439 218 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 ASMTP46597 345 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 FNTBP49356 437 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 ACADVLP49748 655 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 NCALDP61601 193 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 HHEXQ03014 270 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 EMX2Q04743 252 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 CSTF1Q05048 431 aaKnown RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 ACTN3Q08043 901 aaPredicted RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 TUBB3Q13509 450 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 MAP7Q14244 749 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 FZD2Q14332 565 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 KIR2DS3Q14952 304 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 ABRAXAS2Q15018 415 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 CCSMST1Q4G0I0 132 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 ZNF787Q6DD87 383 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 PRMT9Q6P2P2 845 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 SCIMPQ6UWF3 145 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 NXPE4Q6UWF7 544 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 TMIGD1Q6UXZ0 262 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 CHSY3Q70JA7 882 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 TRIM46Q7Z4K8 759 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 ARPINQ7Z6K5 226 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 ZFAND4Q86XD8 727 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 SNX32Q86XE0 403 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 SYT12Q8IV01 421 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 C1orf210Q8IVY1 113 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 C10orf67Q8IYJ2 551 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 FAM46DQ8NEK8 389 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 OR10G6Q8NH81 332 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 CDC26Q8NHZ8 85 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 HMGCLL1Q8TB92 370 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 GPBAR1Q8TDU6 330 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 TSPEARQ8WU66 669 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 GAB3Q8WWW8 586 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 USP7Q93009 1102 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 STMN2Q93045 179 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 MTFMTQ96DP5 389 aaKnown RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 AHCYL2Q96HN2 611 aaKnown RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 QRFPRQ96P65 431 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 IL17FQ96PD4 163 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 HBEGFQ99075 208 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 PRPF18Q99633 342 aaKnown RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 RTKNQ9BST9 563 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 LRRC61Q9BV99 259 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 NLNQ9BYT8 704 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 DPY30Q9C005 99 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 C1orf21Q9H246 121 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 RMND5AQ9H871 391 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 COPS7BQ9H9Q2 264 aaPredicted RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 GPR27Q9NS67 375 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 AIG1Q9NVV5 245 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 ZIM2Q9NZV7 527 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 VPS29Q9UBQ0 182 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 TBC1D29Q9UFV1 150 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 LEF1Q9UJU2 399 aaPredicted RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 FBXO4Q9UKT5 387 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 RAB23Q9ULC3 237 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 SNX7Q9UNH6 387 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 WDR37Q9Y2I8 494 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 NDUFAF1Q9Y375 327 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 ENTPD2Q9Y5L3 495 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 RANBP2P49792 3224 aaKnown RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 ADAMTS20P59510 1910 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 PI4KAP42356 2102 aa5.96□□□□□ -1.45
LIG3-206ENST00000586058 NUP210LQ5VU65 1888 aa5.96□□□□□ -1.45
LIG3-206ENST00000586058 KRT87PA6NCN2 255 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 RHPN2P1A8MT19 583 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 CAPN14A8MX76 684 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 FOXE1O00358 373 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 PPP6CO00743 305 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 MRASO14807 208 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 AIM2O14862 343 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 GUCY1B2O75343 617 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 CER1O95813 267 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 SERPIND1P05546 499 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 CHRM5P08912 532 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 SLC35G6P0C7Q6 338 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 NQO1P15559 274 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 NPPBP16860 134 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 AMD1P17707 334 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PRPH2P23942 346 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PTX3P26022 381 aaPredicted RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 VARSP26640 1264 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 HOXD12P35452 270 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PGM1P36871 562 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 CASP2P42575 452 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 CPA2P48052 419 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 HTR6P50406 440 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 POLR2JP52435 117 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 CORO7P57737 925 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 NXPH1P58417 271 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 RPS15AP62244 130 aaKnown RBP5.96□□□□□ -1.46
LIG3-206ENST00000586058 SKP1P63208 163 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 REEP5Q00765 189 aa5.96□□□□□ -1.46
LIG3-206ENST00000586058 PRDX1Q06830 199 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms