RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 FAM219BQ5XKK7 198 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 GUSBP11Q6P575 273 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 EPGNQ6UW88 154 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 SPRED1Q7Z699 444 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 RFWD2Q8NHY2 731 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 WDR20Q8TBZ3 569 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 C10orf82Q8WW14 230 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 CCDC74AQ96AQ1 378 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 MAELQ96JY0 434 aaKnown RBP15.52■□□□□ 0.08
SS18-226ENST00000585241 CD180Q99467 661 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 ELAC2Q9BQ52 826 aaKnown RBP15.52■□□□□ 0.08
SS18-226ENST00000585241 FAM107BQ9H098 131 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 ABCG4Q9H172 646 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 SPNS1Q9H2V7 528 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 TUBB1Q9H4B7 451 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 MEAF6Q9HAF1 191 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 TMEM9BQ9NQ34 198 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 EVA1BQ9NVM1 165 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 SNX7Q9UNH6 387 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 SNX6Q9UNH7 406 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 TIMM22Q9Y584 194 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 PCDHGA11Q9Y5H2 935 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 ASXL3Q9C0F0 2248 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 MN1Q10571 1320 aaPredicted RBP15.51■□□□□ 0.07
SS18-226ENST00000585241 A0A0J9YY10 115 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 OR2A25A4D2G3 310 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 TRPC5OSA6NMA1 111 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 H7BY64 318 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 MANBAO00462 879 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 ZW10O43264 779 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 CHEK2O96017 543 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 KRT6AP02538 564 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 KRT6BP04259 564 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 JUNP05412 331 aaKnown RBP15.51■□□□□ 0.07
SS18-226ENST00000585241 MYF5P13349 255 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 CD59P13987 128 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 CXCR2P25025 360 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 SERPINB3P29508 390 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 LSSP48449 732 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 KRT6CP48668 564 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 AQP5P55064 265 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 OR1D5P58170 312 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 BTKQ06187 659 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 CPSF6Q16630 551 aaKnown RBP eCLIP15.51■□□□□ 0.07
SS18-226ENST00000585241 XKR7Q5GH72 579 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 TCHHL1Q5QJ38 904 aaPredicted RBP15.51■□□□□ 0.07
SS18-226ENST00000585241 FRG2Q64ET8 278 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 ARMC6Q6NXE6 501 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 MED27Q6P2C8 311 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 PRR23CQ6ZRP0 262 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 PAQR7Q86WK9 346 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 CARFQ8N187 725 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 KRT78Q8N1N4 520 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 BAHD1Q8TBE0 780 aaPredicted RBP15.51■□□□□ 0.07
SS18-226ENST00000585241 BCAS4Q8TDM0 211 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 ZNF473Q8WTR7 871 aaKnown RBP15.51■□□□□ 0.07
SS18-226ENST00000585241 UBE2E3Q969T4 207 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 ZUFSPQ96AP4 578 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 REPS1Q96D71 796 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 PRR11Q96HE9 360 aaPredicted RBP15.51■□□□□ 0.07
SS18-226ENST00000585241 PRAP1Q96NZ9 151 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 FRG2BQ96QU4 278 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 AIF1LQ9BQI0 150 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 PLCD4Q9BRC7 762 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 DPH7Q9BTV6 452 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 RXFP3Q9NSD7 469 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 ZNF490Q9ULM2 529 aaPredicted RBP15.51■□□□□ 0.07
SS18-226ENST00000585241 PPT2Q9UMR5 302 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 ASCC3Q8N3C0 2202 aaKnown RBP15.51■□□□□ 0.07
SS18-226ENST00000585241 RP1P56715 2156 aa15.51■□□□□ 0.07
SS18-226ENST00000585241 DMDP11532 3685 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 TRBC2A0A5B9 178 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 NPIPB8E9PQR5 432 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 SDHDO14521 159 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 FFAR3O14843 346 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 PIP5K1BO14986 540 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 GPR42O15529 346 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 DUX1O43812 170 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 SKAP2O75563 359 aaPredicted RBP15.5■□□□□ 0.07
SS18-226ENST00000585241 C9P02748 559 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 CD1CP29017 333 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 PPP1CAP62136 330 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 PDCD2Q16342 344 aaPredicted RBP15.5■□□□□ 0.07
SS18-226ENST00000585241 CLPPQ16740 277 aaPredicted RBP15.5■□□□□ 0.07
SS18-226ENST00000585241 HIST2H2ACQ16777 129 aaPredicted RBP15.5■□□□□ 0.07
SS18-226ENST00000585241 PERM1Q5SV97 790 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 HIST2H2AA3Q6FI13 130 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 TRIM46Q7Z4K8 759 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 TRIM73Q86UV7 250 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 MYLK4Q86YV6 388 aaPredicted RBP15.5■□□□□ 0.07
SS18-226ENST00000585241 FAM20CQ8IXL6 584 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 OR7G3Q8NG95 312 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 C19orf60Q96EN9 201 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 SEC16BQ96JE7 1060 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 NUF2Q9BZD4 464 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 CHRNA10Q9GZZ6 450 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 RHBGQ9H310 441 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 RABEP2Q9H5N1 569 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 PFDN4Q9NQP4 134 aa15.5■□□□□ 0.07
SS18-226ENST00000585241 C1GALT1Q9NS00 363 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms