RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 GNAO1P09471 354 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 GRIA2P42262 883 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 CLCNKBP51801 687 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 ARFRP1Q13795 201 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 MSS51Q4VC12 460 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 CIR1Q86X95 450 aaPredicted RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 NXPE1Q8N323 547 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 AQP11Q8NBQ7 271 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 C2orf15Q8WU43 125 aaKnown RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 COQ8BQ96D53 544 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 CYP2S1Q96SQ9 504 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 ZDHHC3Q9NYG2 299 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 COL20A1Q9P218 1284 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 GALPQ9UBC7 116 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TLR6Q9Y2C9 796 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 PCDHGB2Q9Y5G2 931 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 PREX1Q8TCU6 1659 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 DENRO43583 198 aaKnown RBP12.71□□□□□ -0.37
RNF43-208ENST00000584437 RASAL1O95294 804 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 CDH11P55287 796 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 SLC25A11Q02978 314 aaKnown RBP12.71□□□□□ -0.37
RNF43-208ENST00000584437 SEC23BQ15437 767 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 VMACQ2NL98 169 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 KLHL26Q53HC5 615 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 CLEC12AQ5QGZ9 265 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 OR2AJ1Q8NGZ0 328 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 UBQLN2Q9UHD9 624 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 MGAT4BQ9UQ53 548 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 ZNF451Q9Y4E5 1061 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 MYBPHLA2RUH7 354 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 AXIN1O15169 862 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 ZNF20P17024 532 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 RHEBQ15382 184 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 GRK1Q15835 563 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 LRRC69Q6ZNQ3 347 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 NAT16Q8N8M0 369 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 LCN9Q8WX39 176 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 FUBP3Q96I24 572 aaKnown RBP eCLIP12.71□□□□□ -0.37
RNF43-208ENST00000584437 METTL8Q9H825 291 aaKnown RBP12.71□□□□□ -0.37
RNF43-208ENST00000584437 M0R036 132 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 DFNA5O60443 496 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 PVALBP20472 110 aaPredicted RBP12.71□□□□□ -0.37
RNF43-208ENST00000584437 MAPK3P27361 379 aaPredicted RBP12.71□□□□□ -0.37
RNF43-208ENST00000584437 CLCN7P51798 805 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 PLA2G16P53816 162 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 ST3GAL3Q11203 375 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 RPA4Q13156 261 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 RABL3Q5HYI8 236 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 ZNF598Q86UK7 904 aaKnown RBP12.71□□□□□ -0.37
RNF43-208ENST00000584437 CCDC54Q8NEL0 328 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 OR9I1Q8NGQ6 314 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 GPR151Q8TDV0 419 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 ALPK1Q96QP1 1244 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 PKP4Q99569 1192 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 PTPN18Q99952 460 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 MYOCQ99972 504 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 B3GNT4Q9C0J1 378 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 MRM3Q9HC36 420 aaKnown RBP12.71□□□□□ -0.37
RNF43-208ENST00000584437 CTPS2Q9NRF8 586 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 CCM2LQ9NUG4 571 aaPredicted RBP12.71□□□□□ -0.37
RNF43-208ENST00000584437 TAS2R10Q9NYW0 307 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 CNOT11Q9UKZ1 510 aaKnown RBP12.71□□□□□ -0.37
RNF43-208ENST00000584437 HEBP2Q9Y5Z4 205 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 CDH10Q9Y6N8 788 aa12.71□□□□□ -0.37
RNF43-208ENST00000584437 MANBAO00462 879 aa12.71□□□□□ -0.38
RNF43-208ENST00000584437 RP2O75695 350 aa12.71□□□□□ -0.38
RNF43-208ENST00000584437 PORP16435 677 aaPredicted RBP12.71□□□□□ -0.38
RNF43-208ENST00000584437 MAGEA8P43361 318 aa12.71□□□□□ -0.38
RNF43-208ENST00000584437 PTGR1Q14914 329 aa12.71□□□□□ -0.38
RNF43-208ENST00000584437 PNLDC1Q8NA58 520 aaKnown RBP12.71□□□□□ -0.38
RNF43-208ENST00000584437 KIAA1191Q96A73 305 aa12.71□□□□□ -0.38
RNF43-208ENST00000584437 S100A16Q96FQ6 103 aaKnown RBP12.71□□□□□ -0.38
RNF43-208ENST00000584437 LMLNQ96KR4 655 aa12.71□□□□□ -0.38
RNF43-208ENST00000584437 PRRG4Q9BZD6 226 aa12.71□□□□□ -0.38
RNF43-208ENST00000584437 ARHGEF28Q8N1W1 1705 aaKnown RBP12.71□□□□□ -0.38
RNF43-208ENST00000584437 A0A1B0GVC2 190 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 LRRN3E7EW58 273 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 FAM163BP0C2L3 166 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 ZNF81P51508 661 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 C6orf141Q5SZD1 244 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 TMEM53Q6P2H8 277 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 SLC36A4Q6YBV0 504 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 OR2L2Q8NH16 312 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 GAL3ST3Q96A11 431 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 MUS81Q96NY9 551 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 ZNF350Q9GZX5 532 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 LRRN3Q9H3W5 708 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 LCHNA4D1U4 455 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 FAM170BA6NMN3 283 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 OPN1SWP03999 348 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 EBLN1P0CF75 366 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 FGF3P11487 239 aaPredicted RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 IL7P13232 177 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 GADD45AP24522 165 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 OR12D2P58182 307 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 ZNF267Q14586 743 aaPredicted RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 PAFAH1B3Q15102 231 aaKnown RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 USF2Q15853 346 aaPredicted RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 MAP1SQ66K74 1059 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms