RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 FOXD3Q9UJU5 478 aaPredicted RBP8.66□□□□□ -1.02
GGA3-212ENST00000582376 MPDZO75970 2070 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 SIX3O95343 332 aaPredicted RBP8.65□□□□□ -1.02
GGA3-212ENST00000582376 CNOT4O95628 575 aaKnown RBP8.65□□□□□ -1.02
GGA3-212ENST00000582376 EPOP01588 193 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 FTLP02792 175 aaPredicted RBP8.65□□□□□ -1.02
GGA3-212ENST00000582376 HRGP04196 525 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 CYC1P08574 325 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 ITGALP20701 1170 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 CDK11BP21127 795 aaKnown RBP8.65□□□□□ -1.02
GGA3-212ENST00000582376 CD9P21926 228 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 TPP2P29144 1249 aaPredicted RBP8.65□□□□□ -1.02
GGA3-212ENST00000582376 SSR1P43307 286 aaKnown RBP8.65□□□□□ -1.02
GGA3-212ENST00000582376 ITGA8P53708 1063 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 XIAPP98170 497 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 DMTNQ08495 405 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 BRD3Q15059 726 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 POU4F3Q15319 338 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 SLC1A5Q15758 541 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 HADHQ16836 314 aaKnown RBP8.65□□□□□ -1.02
GGA3-212ENST00000582376 SYT16Q17RD7 645 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 PRTGQ2VWP7 1150 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 TCP11X2Q5H9J9 407 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 FKBP15Q5T1M5 1219 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 RIPPLY2Q5TAB7 128 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 HEPHL1Q6MZM0 1159 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 RNF44Q7L0R7 432 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 ANKRD37Q7Z713 158 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 RPS19BP1Q86WX3 136 aaKnown RBP8.65□□□□□ -1.02
GGA3-212ENST00000582376 ZNF227Q86WZ6 799 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 PQLC3Q8N755 202 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 LMNTD1Q8N9Z9 388 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 MLKLQ8NB16 471 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 ZFP62Q8NB50 900 aaPredicted RBP8.65□□□□□ -1.02
GGA3-212ENST00000582376 NEK11Q8NG66 645 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 OR4K2Q8NGD2 314 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 SMC6Q96SB8 1091 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 FAM96AQ9H5X1 160 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 ZDHHC3Q9NYG2 299 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 ARL5AQ9Y689 179 aa8.65□□□□□ -1.02
GGA3-212ENST00000582376 IGLV3-16A0A075B6K0 115 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 A0A1W2PPR1 153 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 OR14I1A6ND48 311 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 SOWAHDA6NJG2 315 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 C2orf81A6NN90 581 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 WDR1O75083 606 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 FERP16591 822 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 EEF1GP26641 437 aaKnown RBP8.64□□□□□ -1.03
GGA3-212ENST00000582376 GJC1P36383 396 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 AGTR2P50052 363 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 HLCSP50747 726 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 NR0B1P51843 470 aaKnown RBP8.64□□□□□ -1.03
GGA3-212ENST00000582376 GPR85P60893 370 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 MAT1AQ00266 395 aaKnown RBP8.64□□□□□ -1.03
GGA3-212ENST00000582376 KRTAP1-1Q07627 177 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 PDK2Q15119 407 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 KRTAP24-1Q3LI83 254 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 FBXL19-AS1Q494R0 122 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 MINDY4Q4G0A6 757 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 TEX44Q53QW1 395 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 C1orf185Q5T7R7 199 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 KIAA0930Q6ICG6 404 aaPredicted RBP8.64□□□□□ -1.03
GGA3-212ENST00000582376 PAPD4Q6PIY7 484 aaKnown RBP8.64□□□□□ -1.03
GGA3-212ENST00000582376 SNX20Q7Z614 316 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 KIF18BQ86Y91 864 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 HIPK1Q86Z02 1210 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 MAP7D3Q8IWC1 876 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 NIPA2Q8N8Q9 360 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 RELL2Q8NC24 303 aaPredicted RBP8.64□□□□□ -1.03
GGA3-212ENST00000582376 OR2L8Q8NGY9 312 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 LINC01560Q8TB33 94 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 ELMO1Q92556 727 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 FAF2Q96CS3 445 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 TRIM11Q96F44 468 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 PERPQ96FX8 193 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 IL17FQ96PD4 163 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 SYT11Q9BT88 431 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 FICDQ9BVA6 458 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 MTRF1LQ9UGC7 380 aaKnown RBP8.64□□□□□ -1.03
GGA3-212ENST00000582376 ADGRE2Q9UHX3 823 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 RUVBL1Q9Y265 456 aaKnown RBP8.64□□□□□ -1.03
GGA3-212ENST00000582376 ZNF407Q9C0G0 2248 aa8.64□□□□□ -1.03
GGA3-212ENST00000582376 A0A0A6YYC8 382 aaPredicted RBP8.63□□□□□ -1.03
GGA3-212ENST00000582376 MBD3L4A6NDZ8 208 aaPredicted RBP8.63□□□□□ -1.03
GGA3-212ENST00000582376 MBD3L5A6NJ08 208 aaPredicted RBP8.63□□□□□ -1.03
GGA3-212ENST00000582376 HSPB2A8KAH6 182 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 H0YGG7 62 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 I3L1I5 382 aaPredicted RBP8.63□□□□□ -1.03
GGA3-212ENST00000582376 DVL2O14641 736 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 FOXS1O43638 330 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 NRP2O60462 931 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 TPM2P07951 284 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 MYBL1P10243 752 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 GZMAP12544 262 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 BMP5P22003 454 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 PTPN3P26045 913 aa8.63□□□□□ -1.03
GGA3-212ENST00000582376 TRHRP34981 398 aaPredicted RBP8.63□□□□□ -1.03
GGA3-212ENST00000582376 ARF3P61204 181 aaPredicted RBP8.63□□□□□ -1.03
GGA3-212ENST00000582376 PLOD1Q02809 727 aaPredicted RBP8.63□□□□□ -1.03
GGA3-212ENST00000582376 ACTN3Q08043 901 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms