RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PKNOX1P55347 436 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 CSNK1G2P78368 415 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 OCRLQ01968 901 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 MEF2AQ02078 507 aaPredicted RBP9.16□□□□□ -0.94
RFFL-210ENST00000582308 GALNT1Q10472 559 aaPredicted RBP9.16□□□□□ -0.94
RFFL-210ENST00000582308 ILKQ13418 452 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 TBCCQ15814 346 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 CLPPQ16740 277 aaPredicted RBP9.16□□□□□ -0.94
RFFL-210ENST00000582308 CCDC157Q569K6 752 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 XKR6Q5GH73 641 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 CACHD1Q5VU97 1274 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 TMEM71Q6P5X7 295 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 MILR1Q7Z6M3 343 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 SLCO6A1Q86UG4 719 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 PAQR7Q86WK9 346 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 L3MBTL4Q8NA19 623 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 ZNF740Q8NDX6 193 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 OR4F6Q8NGB9 312 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 OR4D9Q8NGE8 314 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 ATP6V1E2Q96A05 226 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 TRAPPC9Q96Q05 1148 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 GFM1Q96RP9 751 aaKnown RBP9.16□□□□□ -0.94
RFFL-210ENST00000582308 CD180Q99467 661 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 PLCD4Q9BRC7 762 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 EHD1Q9H4M9 534 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 CCDC134Q9H6E4 229 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 SYNDIG1Q9H7V2 258 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 ACTR8Q9H981 624 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 PELI2Q9HAT8 420 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 MID1IP1Q9NPA3 183 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 SLCO1B3Q9NPD5 702 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 C1GALT1Q9NS00 363 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 TMEM184CQ9NVA4 438 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 THAP1Q9NVV9 213 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 GEMIN8Q9NWZ8 242 aaKnown RBP9.16□□□□□ -0.94
RFFL-210ENST00000582308 KLHL3Q9UH77 587 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 ZDHHC2Q9UIJ5 367 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 SNX7Q9UNH6 387 aa9.16□□□□□ -0.94
RFFL-210ENST00000582308 SCN2AQ99250 2005 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 IGHV5-10-1A0A0J9YXX1 117 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 SPAARA0A1B0GVQ0 90 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 A8MU76 341 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 TMEM233B4DJY2 109 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 TCP11X1B4DZS4 312 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 D6RAR5 112 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 GIPC1O14908 333 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 HAT1O14929 419 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 LCMT2O60294 686 aaKnown RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 UGDHO60701 494 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 CTSVO60911 334 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 RASSF9O75901 435 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 DKK1O94907 266 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 ESRRBO95718 433 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 HSPA4LO95757 839 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 FGF4P08620 206 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 EBLN1P0CF75 366 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 HRH2P25021 359 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 ARL1P40616 181 aaPredicted RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 FOXA1P55317 472 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 REEP5Q00765 189 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 E2F1Q01094 437 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 INSM1Q01101 510 aaPredicted RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 ZFP36L1Q07352 338 aaKnown RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 SPIDRQ14159 915 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 SNAP47Q5SQN1 464 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 LIPJQ5W064 366 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 FBXO42Q6P3S6 717 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 PRSS42Q7Z5A4 293 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 ARHGAP22Q7Z5H3 698 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 ADCK2Q7Z695 626 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 CUZD1Q86UP6 607 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 PLD3Q8IV08 490 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 SLITRK4Q8IW52 837 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 ZNF781Q8N8C0 355 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 CDYL2Q8N8U2 506 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 C19orf47Q8N9M1 422 aaKnown RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 KLHL6Q8WZ60 621 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 ZUFSPQ96AP4 578 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 GRAMD1AQ96CP6 724 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 PTCD3Q96EY7 689 aaKnown RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 KCNA7Q96RP8 456 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 DPYSL5Q9BPU6 564 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 AIF1LQ9BQI0 150 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 ZMYND15Q9H091 742 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 ILKAPQ9H0C8 392 aaPredicted RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 SYNPO2LQ9H987 977 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 EML4Q9HC35 981 aaKnown RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 FAM60AQ9NP50 221 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 PNPOQ9NVS9 261 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 HAO1Q9UJM8 370 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 PILRAQ9UKJ1 303 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 ZNF490Q9ULM2 529 aaPredicted RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.15□□□□□ -0.94
RFFL-210ENST00000582308 RAP2CQ9Y3L5 183 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 TRAF6Q9Y4K3 522 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 PCDHGA1Q9Y5H4 931 aa9.15□□□□□ -0.94
RFFL-210ENST00000582308 SPTBN4Q9H254 2564 aa9.14□□□□□ -0.95
RFFL-210ENST00000582308 TRBC2A0A5B9 178 aa9.14□□□□□ -0.95
RFFL-210ENST00000582308 FEZF1A0PJY2 475 aa9.14□□□□□ -0.95
RFFL-210ENST00000582308 FFAR3O14843 346 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms