RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 OR5K2Q8NHB8 316 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 FAM222BQ8WU58 562 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 TMEM158Q8WZ71 300 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 MRRFQ96E11 262 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 DCUN1D1Q96GG9 259 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 ZNF670Q9BS34 389 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 KCNK13Q9HB14 408 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 LUC7LQ9NQ29 371 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 PNPLA3Q9NST1 481 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 C14orf105Q9NVL8 296 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 HACD3Q9P035 362 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 CIDEBQ9UHD4 219 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 POLG2Q9UHN1 485 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 ALG6Q9Y672 507 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 SCINQ9Y6U3 715 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 TGP01266 2768 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 A0A0J9YVX5 310 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 OR2W5A6NFC9 320 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 TFECO14948 347 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 STX7O15400 261 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 FOXS1O43638 330 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 SRPX2O60687 465 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 PDE9AO76083 593 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 SUN1O94901 812 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 AP2A1O95782 977 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 PRSS56P0CW18 603 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 C8orf89P0DMQ9 161 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 EEF1GP26641 437 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 AP1B1Q10567 949 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 PIGHQ14442 188 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 MUM1Q2TAK8 710 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 SLC25A35Q3KQZ1 300 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 DPCR1Q3MIW9 517 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 GXYLT1Q4G148 440 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 C4orf48Q5BLP8 95 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 PPP1R2P3Q6NXS1 205 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 CPEB2Q7Z5Q1 589 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 ARHGEF39Q8N4T4 335 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 CLDN19Q8N6F1 224 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 OR4K2Q8NGD2 314 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 OR5M3Q8NGP4 307 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 OR10Q1Q8NGQ4 319 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 C16orf52Q8NHV5 167 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 SLCO2A1Q92959 643 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 OXNAD1Q96HP4 312 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 IL17FQ96PD4 163 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 COPS8Q99627 209 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 SH3GL2Q99962 352 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 BDH2Q9BUT1 245 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 FICDQ9BVA6 458 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 YIPF2Q9BWQ6 316 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 VN1R1Q9GZP7 353 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 MKKSQ9NPJ1 570 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 CRLS1Q9UJA2 301 aa7.21□□□□□ -1.26
SMARCE1-217ENST00000580654 A0A0A6YYK5 440 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 SLC5A10A0PJK1 596 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 TARM1B6A8C7 271 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 SYT5O00445 386 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 DDX3XO00571 662 aaKnown RBP eCLIP7.2□□□□□ -1.263e-10■■■■□ 24
SMARCE1-217ENST00000580654 CCL22O00626 93 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 ARHGEF9O43307 516 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 PRMT3O60678 531 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 EPOP01588 193 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 EIF2S1P05198 315 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 RALBP11234 206 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 GZMAP12544 262 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 FERP16591 822 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 NFKB1P19838 968 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 CD9P21926 228 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 TACR1P25103 407 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 PTPN3P26045 913 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 ACVR2AP27037 513 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 PSMB5P28074 263 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 TPP2P29144 1249 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 UQCRC1P31930 480 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 GJC1P36383 396 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 TAS2R40P59535 323 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 MAT1AQ00266 395 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 MSLNQ13421 630 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 BRD3Q15059 726 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 KRT31Q15323 416 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 TEX44Q53QW1 395 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 FBXO42Q6P3S6 717 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 ARHGAP11AQ6P4F7 1023 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 NPNTQ6UXI9 565 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 RNF44Q7L0R7 432 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 ZNF571Q7Z3V5 609 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 WDR53Q7Z5U6 358 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 ANKRD37Q7Z713 158 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 SULF2Q8IWU5 870 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 LRRC75A-AS1Q8N1F1 130 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 HORMAD2Q8N7B1 307 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 POGLUT1Q8NBL1 392 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 RELL2Q8NC24 303 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 NEK11Q8NG66 645 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 OR5M9Q8NGP3 310 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 OR13C4Q8NGS5 318 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 M1APQ8TC57 530 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 ZUFSPQ96AP4 578 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms