RNA–Protein interactions for RNA: ENST00000580002.5

SHMT1-207, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2

Gene SHMT1, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-207ENST00000580002 UGDHO60701 494 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 PEX11AO75192 247 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 UBXN7O94888 489 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 PCNAP12004 261 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 PVRP15151 417 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 ALDH4A1P30038 563 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 CCT8P50990 548 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 OR1D5P58170 312 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 FRG2Q64ET8 278 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 LARP4Q71RC2 724 aaKnown RBP eCLIP24.14■■□□□ 1.45
SHMT1-207ENST00000580002 ADCK2Q7Z695 626 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 RBM12BQ8IXT5 1001 aaKnown RBP24.14■■□□□ 1.45
SHMT1-207ENST00000580002 ANKS4BQ8N8V4 417 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 FRG2BQ96QU4 278 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 ELOVL6Q9H5J4 265 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 RXFP3Q9NSD7 469 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 BTBD3Q9Y2F9 522 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 PCDHGA5Q9Y5G8 931 aa24.14■■□□□ 1.45
SHMT1-207ENST00000580002 OR5K3A6NET4 321 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 CHEK2O96017 543 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 SYPP08247 313 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 HNF4AP41235 474 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 GRIA3P42263 894 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 VN1R5Q7Z5H4 357 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 Q8N9G6 341 aaPredicted RBP24.13■■□□□ 1.45
SHMT1-207ENST00000580002 ANKRD53Q8N9V6 530 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 OR4K1Q8NGD4 311 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 OR4C6Q8NH72 309 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 TUBGCP3Q96CW5 907 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 APOLD1Q96LR9 279 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 ACPTQ9BZG2 426 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 NMUR2Q9GZQ4 415 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 EHD1Q9H4M9 534 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 APOBEC2Q9Y235 224 aaKnown RBP24.13■■□□□ 1.45
SHMT1-207ENST00000580002 HEATR5BQ9P2D3 2071 aa24.13■■□□□ 1.45
SHMT1-207ENST00000580002 LNP1A1A4G5 178 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 RHPN2P1A8MT19 583 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 H0YIV9 168 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 ETHE1O95571 254 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 CER1O95813 267 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 STATHP02808 62 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 CCR8P51685 355 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 COL9A2Q14055 689 aaPredicted RBP24.12■■□□□ 1.45
SHMT1-207ENST00000580002 KIR2DS3Q14952 304 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 RBBP5Q15291 538 aaKnown RBP24.12■■□□□ 1.45
SHMT1-207ENST00000580002 FITM2Q8N6M3 262 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 SLC45A3Q96JT2 553 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 FCRL4Q96PJ5 515 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 PELI2Q9HAT8 420 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 ARMCX1Q9P291 453 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 PADI4Q9UM07 663 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 SNX6Q9UNH7 406 aa24.12■■□□□ 1.45
SHMT1-207ENST00000580002 HAT1O14929 419 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 B4GAT1O43505 415 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 KRT6AP02538 564 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 KRT6BP04259 564 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 AMD1P17707 334 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 KRT6CP48668 564 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 LAIR1Q6GTX8 287 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 MED27Q6P2C8 311 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 HUS1BQ8NHY5 278 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 CATSPER2Q96P56 530 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 EFCAB11Q9BUY7 163 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 ABCG4Q9H172 646 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 STN1Q9H668 368 aaKnown RBP24.11■■□□□ 1.45
SHMT1-207ENST00000580002 MAGEB17A8MXT2 336 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 DFNA5O60443 496 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 NCF2P19878 526 aaPredicted RBP24.11■■□□□ 1.45
SHMT1-207ENST00000580002 MAGP20916 626 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 CMPK1P30085 196 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 UBAP2LQ14157 1087 aaKnown RBP24.11■■□□□ 1.45
SHMT1-207ENST00000580002 GALNTL6Q49A17 601 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 SPDYAQ5MJ70 313 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 C6orf89Q6UWU4 347 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 ACAD11Q709F0 780 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 PLCD4Q9BRC7 762 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 UCK1Q9HA47 277 aa24.11■■□□□ 1.45
SHMT1-207ENST00000580002 LILRA5A6NI73 299 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 FCHO1O14526 889 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 KIF1CO43896 1103 aaKnown RBP24.1■■□□□ 1.45
SHMT1-207ENST00000580002 PROS1P07225 676 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 ALDOCP09972 364 aaKnown RBP24.1■■□□□ 1.45
SHMT1-207ENST00000580002 CYP4F2P78329 520 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 REEP5Q00765 189 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 IFT88Q13099 833 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 FCRL6Q6DN72 434 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 ZCCHC8Q6NZY4 707 aaKnown RBP24.1■■□□□ 1.45
SHMT1-207ENST00000580002 GUSBP11Q6P575 273 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 SPESP1Q6UW49 350 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 TRIM46Q7Z4K8 759 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 OOSP2Q86WS3 158 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 LAS2Q8IYD9 372 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 KIRREL3Q8IZU9 778 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 ACTRT2Q8TDY3 377 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 CCT6BQ92526 530 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 MACROD1Q9BQ69 325 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 MYLK2Q9H1R3 596 aa24.1■■□□□ 1.45
SHMT1-207ENST00000580002 CPED1A4D0V7 1026 aa24.09■■□□□ 1.45
SHMT1-207ENST00000580002 FAM221BA6H8Z2 402 aa24.09■■□□□ 1.45
SHMT1-207ENST00000580002 C2orf74A8MZ97 194 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms