RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 CUZD1Q86UP6 607 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 CAND1Q86VP6 1230 aaKnown RBP13.06□□□□□ -0.32
GGA3-208ENST00000579743 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
GGA3-208ENST00000579743 ST6GALNAC3Q8NDV1 305 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 SUN3Q8TAQ9 357 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 ASB11Q8WXH4 323 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 FAM129AQ9BZQ8 928 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 PCYOX1Q9UHG3 505 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 TEKT2Q9UIF3 430 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 TRMT6Q9UJA5 497 aaKnown RBP13.06□□□□□ -0.32
GGA3-208ENST00000579743 RUVBL1Q9Y265 456 aaKnown RBP13.06□□□□□ -0.32
GGA3-208ENST00000579743 DHRS7Q9Y394 339 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 SPTBN1Q01082 2364 aaKnown RBP13.06□□□□□ -0.32
GGA3-208ENST00000579743 PCM1Q15154 2024 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 IDSB3KWA1 339 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 E7ENX8 843 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 MASP2O00187 686 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 ALOX12BO75342 701 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 HIST1H2AGP0C0S8 130 aaPredicted RBP13.05□□□□□ -0.32
GGA3-208ENST00000579743 HIST1H2ADP20671 130 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 CCND1P24385 295 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 COILP38432 576 aaPredicted RBP13.05□□□□□ -0.32
GGA3-208ENST00000579743 TAP2Q03519 686 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 FAM53BQ14153 422 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 PPP1R7Q15435 360 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 VWA2Q5GFL6 755 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 ATG9BQ674R7 924 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 LINC00696Q6ZRV3 163 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 UBE2R2Q712K3 238 aaPredicted RBP13.05□□□□□ -0.32
GGA3-208ENST00000579743 PCGF5Q86SE9 256 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 PAQR7Q86WK9 346 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 PPIL6Q8IXY8 311 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 RASGEF1CQ8N431 466 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 ZNF480Q8WV37 535 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 THAP11Q96EK4 314 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 HIST1H2AHQ96KK5 128 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 SERPINB12Q96P63 405 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 HIST1H2AJQ99878 128 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 NAT9Q9BTE0 207 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 H2AFJQ9BTM1 129 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 TGIF2Q9GZN2 237 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 ZBTB20Q9HC78 741 aaPredicted RBP13.05□□□□□ -0.32
GGA3-208ENST00000579743 CCDC177Q9NQR7 707 aaPredicted RBP13.05□□□□□ -0.32
GGA3-208ENST00000579743 FBXO6Q9NRD1 293 aaPredicted RBP13.05□□□□□ -0.32
GGA3-208ENST00000579743 TMEM184CQ9NVA4 438 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 C19orf25Q9UFG5 118 aaPredicted RBP13.05□□□□□ -0.32
GGA3-208ENST00000579743 FBXO5Q9UKT4 447 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 MRPS2Q9Y399 296 aaKnown RBP13.05□□□□□ -0.32
GGA3-208ENST00000579743 NUP210LQ5VU65 1888 aa13.05□□□□□ -0.32
GGA3-208ENST00000579743 USP9YO00507 2555 aaPredicted RBP13.04□□□□□ -0.32
GGA3-208ENST00000579743 TRAV17A0A0B4J275 112 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 A1L4Q6 167 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 KRT87PA6NCN2 255 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 GFYI3L273 518 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 KIF5CO60282 957 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 BMP10O95393 424 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 TTC4O95801 387 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 SERPINA7P05543 415 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 C8GP07360 202 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 CYC1P08574 325 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 EDN3P14138 238 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 SLC26A3P40879 764 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 SLC1A2P43004 574 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 FNTAP49354 379 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 RPS15AP62244 130 aaKnown RBP13.04□□□□□ -0.32
GGA3-208ENST00000579743 CUL1Q13616 776 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 MFSD4BQ5TF39 518 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 ZNF425Q6IV72 752 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 RPUSD3Q6P087 351 aaKnown RBP13.04□□□□□ -0.32
GGA3-208ENST00000579743 KCNMB4Q86W47 210 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 DENND6AQ8IWF6 608 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 TBC1D19Q8N5T2 526 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 BCORP1Q8N888 145 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 PPFIBP2Q8ND30 876 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 OR1N1Q8NGS0 311 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 GRHL3Q8TE85 626 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 FAR1Q8WVX9 515 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 MAGEB10Q96LZ2 347 aaPredicted RBP13.04□□□□□ -0.32
GGA3-208ENST00000579743 C10orf90Q96M02 699 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 CCDC138Q96M89 665 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 OR2A5Q96R48 311 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 GPR21Q99679 349 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 BARD1Q99728 777 aaKnown RBP13.04□□□□□ -0.32
GGA3-208ENST00000579743 TRIM54Q9BYV2 358 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 TAS2R13Q9NYV9 303 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 GALPQ9UBC7 116 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 MKL2Q9ULH7 1088 aa13.04□□□□□ -0.32
GGA3-208ENST00000579743 A0A0A6YYC8 382 aaPredicted RBP13.03□□□□□ -0.32
GGA3-208ENST00000579743 ZCWPW2A0A1B0GU75 182 aa13.03□□□□□ -0.32
GGA3-208ENST00000579743 H0YIG0 161 aa13.03□□□□□ -0.32
GGA3-208ENST00000579743 I3L1I5 382 aaPredicted RBP13.03□□□□□ -0.32
GGA3-208ENST00000579743 ZSCAN12O43309 604 aa13.03□□□□□ -0.32
GGA3-208ENST00000579743 PRR35P0CG20 571 aa13.03□□□□□ -0.32
GGA3-208ENST00000579743 PGAM1P18669 254 aa13.03□□□□□ -0.32
GGA3-208ENST00000579743 SKP1P63208 163 aa13.03□□□□□ -0.32
GGA3-208ENST00000579743 SP140Q13342 867 aa13.03□□□□□ -0.32
GGA3-208ENST00000579743 INAQ16352 499 aa13.03□□□□□ -0.32
GGA3-208ENST00000579743 CYP1B1Q16678 543 aa13.03□□□□□ -0.32
GGA3-208ENST00000579743 HKDC1Q2TB90 917 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms