RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 NKD1Q969G9 470 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 KLHL29Q96CT2 875 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 RAB3IPQ96QF0 476 aaPredicted RBP9.85□□□□□ -0.83
SS18-210ENST00000578700 CCT7Q99832 543 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 C1QTNF3Q9BXJ4 246 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 NUF2Q9BZD4 464 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 ADNPQ9H2P0 1102 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 PARVBQ9HBI1 364 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 TRIM39Q9HCM9 518 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 MID1IP1Q9NPA3 183 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 OPTCQ9UBM4 332 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 ZDHHC2Q9UIJ5 367 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 FIS1Q9Y3D6 152 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 ANKRD36A6QL64 1941 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 ZFC3H1O60293 1989 aaKnown RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 CRYBG3Q68DQ2 2970 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 BLACEA4D250 179 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 KLHL33A6NCF5 533 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 ANKRD65E5RJM6 399 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 CACNB4O00305 520 aaPredicted RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 LIN7AO14910 233 aaPredicted RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 AZIN1O14977 448 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 SLC22A2O15244 555 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 VPS4BO75351 444 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 MTX2O75431 263 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 KATNA1O75449 491 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 DNAJC8O75937 253 aaPredicted RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 SIX3O95343 332 aaPredicted RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 GUCA1CO95843 209 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 OTCP00480 354 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 CATP04040 527 aaKnown RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 FGF4P08620 206 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 RPS17P08708 135 aaKnown RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 PRKAR1AP10644 381 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 LIFP15018 202 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 ARRB2P32121 409 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 CA5AP35218 305 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 HNMTP50135 292 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 AP1S2P56377 157 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 MXRA7P84157 204 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 FOXK1P85037 733 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 CDKL1Q00532 357 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 AGERQ15109 404 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 PCBP2Q15366 365 aaKnown RBP eCLIP9.84□□□□□ -0.83
SS18-210ENST00000578700 BCL7AQ4VC05 210 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 OGFOD3Q6PK18 319 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 GPRIN3Q6ZVF9 776 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 TRAPPC5Q8IUR0 188 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 RASGEF1AQ8N9B8 481 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 PDPRQ8NCN5 879 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 ZNF483Q8TF39 744 aaPredicted RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 ATL1Q8WXF7 558 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 PMEPA1Q969W9 287 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 CMTM5Q96DZ9 223 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 MAGEB10Q96LZ2 347 aaPredicted RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 TAAR9Q96RI9 348 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 EBF4Q9BQW3 602 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 NUDT22Q9BRQ3 303 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 NMUR2Q9GZQ4 415 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 ZMYND15Q9H091 742 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 OR2AG1Q9H205 316 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 SEMA4BQ9NPR2 832 aaPredicted RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 ACSS2Q9NR19 701 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 PHPT1Q9NRX4 125 aaPredicted RBP9.84□□□□□ -0.83
SS18-210ENST00000578700 ARL15Q9NXU5 204 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 TMPRSS11EQ9UL52 423 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 MAN2B2Q9Y2E5 1009 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 CAPN7Q9Y6W3 813 aa9.84□□□□□ -0.83
SS18-210ENST00000578700 GPR89AB7ZAQ6 455 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 E9PBE3 544 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 NKX2-8O15522 239 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 GRID2O43424 1007 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 NUDT21O43809 227 aaKnown RBP9.83□□□□□ -0.84
SS18-210ENST00000578700 CCNT2O60583 730 aaKnown RBP9.83□□□□□ -0.84
SS18-210ENST00000578700 KLHL41O60662 606 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 SKAP2O75563 359 aaPredicted RBP9.83□□□□□ -0.84
SS18-210ENST00000578700 STK16O75716 305 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 ESRRBO95718 433 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 CPNE6O95741 557 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 GPR89BP0CG08 455 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 UROSP10746 265 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 PNLIPP16233 465 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 EPB42P16452 691 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 TEAD1P28347 426 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 EPHA3P29320 983 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 CASRP41180 1078 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 CDH13P55290 713 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 IRX1P78414 480 aaPredicted RBP9.83□□□□□ -0.84
SS18-210ENST00000578700 PPP1R3AQ16821 1122 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 SLC9B1Q4ZJI4 515 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 VWA5B1Q5TIE3 1220 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 NKAIN2Q5VXU1 208 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 PNCKQ6P2M8 343 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 SBSNQ6UWP8 590 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 MAVSQ7Z434 540 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 FAM129CQ86XR2 697 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 DDIASQ8IXT1 998 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 ARHGAP24Q8N264 748 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 ACTRT2Q8TDY3 377 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 ZDHHC1Q8WTX9 485 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms