RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 CYTH2Q99418 400 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 DERL2Q9GZP9 239 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 AKIRIN1Q9H9L7 192 aaPredicted RBP12.24□□□□□ -0.45
CCDC57-211ENST00000578187 SLC6A20Q9NP91 592 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 ENAMQ9NRM1 1142 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 ANKMY1Q9P2S6 941 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 TAC3Q9UHF0 121 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 PLCL2Q9UPR0 1127 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 KLHL20Q9Y2M5 609 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 ZNF451Q9Y4E5 1061 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 PCDHGB7Q9Y5F8 929 aa12.24□□□□□ -0.45
CCDC57-211ENST00000578187 OR2A25A4D2G3 310 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 PHGDHO43175 533 aaKnown RBP12.23□□□□□ -0.45
CCDC57-211ENST00000578187 ZNF749O43361 778 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 KLHL41O60662 606 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 OR2B3O76000 313 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 CCNDBP1O95273 360 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 ACSL3O95573 720 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 IGHEP01854 428 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 HIST1H2AGP0C0S8 130 aaPredicted RBP12.23□□□□□ -0.45
CCDC57-211ENST00000578187 STMN1P16949 149 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 HIST1H2ADP20671 130 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 RORAP35398 523 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 YBX1P67809 324 aaKnown RBP12.23□□□□□ -0.45
CCDC57-211ENST00000578187 NCF4Q15080 339 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 PRAMEF17Q5VTA0 474 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 ICE2Q659A1 982 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 ZNF425Q6IV72 752 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 AGTRAPQ6RW13 159 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 RNF44Q7L0R7 432 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 FAM26EQ8N5C1 309 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 TMEM102Q8N9M5 508 aaPredicted RBP12.23□□□□□ -0.45
CCDC57-211ENST00000578187 EIF1ADQ8N9N8 165 aaKnown RBP12.23□□□□□ -0.45
CCDC57-211ENST00000578187 SLC38A9Q8NBW4 561 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 MIB2Q96AX9 1013 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 HIST1H2AHQ96KK5 128 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 ZNF285Q96NJ3 590 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 IP6K3Q96PC2 410 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 HIST1H2AJQ99878 128 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 H2AFJQ9BTM1 129 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 ACAT2Q9BWD1 397 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 TRIM55Q9BYV6 548 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 MRPS30Q9NP92 439 aaKnown RBP12.23□□□□□ -0.45
CCDC57-211ENST00000578187 CCDC177Q9NQR7 707 aaPredicted RBP12.23□□□□□ -0.45
CCDC57-211ENST00000578187 TXLNGQ9NUQ3 528 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 PCMTD2Q9NV79 361 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 EURLQ9NYK6 297 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 NDOR1Q9UHB4 597 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 SRPK3Q9UPE1 567 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 PLAAQ9Y263 795 aa12.23□□□□□ -0.45
CCDC57-211ENST00000578187 IGKV1-8A0A0C4DH67 115 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 HMX2A2RU54 273 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 PABPN1LA6NDY0 278 aaKnown RBP12.22□□□□□ -0.45
CCDC57-211ENST00000578187 NPEPPSL1A6NEC2 478 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 ESPNB1AK53 854 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 K7EM74 188 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 CDC7O00311 574 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 NRP2O60462 931 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 DPM1O60762 260 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 CTSVO60911 334 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 CTSBP07858 339 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 ABHD2P08910 425 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 CCND1P24385 295 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 VARSP26640 1264 aaKnown RBP12.22□□□□□ -0.45
CCDC57-211ENST00000578187 GCGRP47871 477 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 MLLT10P55197 1068 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 ABATP80404 500 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 CDKL1Q00532 357 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 PRDX1Q06830 199 aaKnown RBP12.22□□□□□ -0.45
CCDC57-211ENST00000578187 CHAF1BQ13112 559 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 ZXDCQ2QGD7 858 aaPredicted RBP12.22□□□□□ -0.45
CCDC57-211ENST00000578187 ZC3H12BQ5HYM0 836 aaKnown RBP12.22□□□□□ -0.45
CCDC57-211ENST00000578187 TEX35Q5T0J7 233 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 PRAMEF13Q5VWM6 474 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 CPZQ66K79 652 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 TLDC1Q6P9B6 456 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 CMC1Q7Z7K0 106 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 PAQR7Q86WK9 346 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 OR56A3Q8NH54 315 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 PROKR1Q8TCW9 393 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 SLC44A1Q8WWI5 657 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 FBXL8Q96CD0 374 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 UBXN10Q96LJ8 280 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 PLCD4Q9BRC7 762 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 DPH7Q9BTV6 452 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 SGPP1Q9BX95 441 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 TRIM54Q9BYV2 358 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 TXLNGYQ9BZA5 131 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 PCBD2Q9H0N5 130 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 ARL15Q9NXU5 204 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 OARD1Q9Y530 152 aa12.22□□□□□ -0.45
CCDC57-211ENST00000578187 A0A087WUV0 522 aaPredicted RBP12.21□□□□□ -0.45
CCDC57-211ENST00000578187 PEX12O00623 359 aa12.21□□□□□ -0.45
CCDC57-211ENST00000578187 ZSCAN9O15535 394 aaPredicted RBP12.21□□□□□ -0.45
CCDC57-211ENST00000578187 SLC35E2BP0CK96 405 aa12.21□□□□□ -0.45
CCDC57-211ENST00000578187 CCDC166P0CW27 439 aa12.21□□□□□ -0.45
CCDC57-211ENST00000578187 CD1DP15813 335 aa12.21□□□□□ -0.45
CCDC57-211ENST00000578187 TNFRSF8P28908 595 aa12.21□□□□□ -0.45
CCDC57-211ENST00000578187 FOLR3P41439 243 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms