RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 FOXO6A8MYZ6 492 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 NPIPA5E9PKD4 350 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 CDK2AP1O14519 115 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 METTL18O95568 372 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 EZRP15311 586 aaKnown RBP12.65□□□□□ -0.38
COPS3-214ENST00000577246 AVPR1BP47901 424 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 SRSF11Q05519 484 aaKnown RBP12.65□□□□□ -0.38
COPS3-214ENST00000577246 FAM53BQ14153 422 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 EXT1Q16394 746 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 MEP1AQ16819 746 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 TSTD2Q5T7W7 516 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 FBXO42Q6P3S6 717 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 CPEB2Q7Z5Q1 589 aaKnown RBP12.65□□□□□ -0.38
COPS3-214ENST00000577246 LRRC6Q86X45 466 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 ZC3H7AQ8IWR0 971 aaKnown RBP12.65□□□□□ -0.38
COPS3-214ENST00000577246 BEST3Q8N1M1 668 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 ACBD4Q8NC06 268 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 AGAP11Q8TF27 550 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 PLCD4Q9BRC7 762 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 STOX2Q9P2F5 926 aaPredicted RBP12.65□□□□□ -0.38
COPS3-214ENST00000577246 NPIPA1Q9UND3 350 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 NEU2Q9Y3R4 380 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 PKDREJQ9NTG1 2253 aa12.65□□□□□ -0.38
COPS3-214ENST00000577246 A0A1W2PPV9 198 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 ZNF839A8K0R7 811 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 FFAR3O14843 346 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 GPR42O15529 346 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 ASNA1O43681 348 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 SEC24DO94855 1032 aaPredicted RBP12.64□□□□□ -0.39
COPS3-214ENST00000577246 ADRA1DP25100 572 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 RPA3P35244 121 aaPredicted RBP12.64□□□□□ -0.39
COPS3-214ENST00000577246 BDKRB1P46663 353 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 AGTR2P50052 363 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 RELAQ04206 551 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 ACVR1Q04771 509 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 TUBA3CQ13748 450 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 SPA17Q15506 151 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 CDSNQ15517 529 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 OR1C1Q15619 314 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 MFSD4BQ5TF39 518 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 H3F3CQ6NXT2 135 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 LRRC8BQ6P9F7 803 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 TUBA3EQ6PEY2 450 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 PPP1R21Q6ZMI0 780 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 SLC5A8Q8N695 610 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 MDS2Q8NDY4 140 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 OR52K1Q8NGK4 314 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 LKAAEAR1Q8TD35 194 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 MCOLN3Q8TDD5 553 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 SMPDL3AQ92484 453 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 SDCCAG3Q96C92 435 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 SCMH1Q96GD3 660 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 FRMD6Q96NE9 622 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 TREX2Q9BQ50 279 aaPredicted RBP12.64□□□□□ -0.39
COPS3-214ENST00000577246 ACAT2Q9BWD1 397 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 KCNK13Q9HB14 408 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 SLC24A3Q9HC58 644 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 KLHL1Q9NR64 748 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 CATSPERZQ9NTU4 200 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 PPT2Q9UMR5 302 aa12.64□□□□□ -0.39
COPS3-214ENST00000577246 TACC2O95359 2948 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 DCHS2Q6V1P9 2916 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 A0A0A6YYC8 382 aaPredicted RBP12.63□□□□□ -0.39
COPS3-214ENST00000577246 H0YIG0 161 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 I3L1I5 382 aaPredicted RBP12.63□□□□□ -0.39
COPS3-214ENST00000577246 NRP2O60462 931 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 DIAPH2O60879 1101 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 NADKO95544 446 aaPredicted RBP12.63□□□□□ -0.39
COPS3-214ENST00000577246 HSD17B2P37059 387 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 ART1P52961 327 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 TAS2R50P59544 299 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 OC90Q02509 493 aaPredicted RBP12.63□□□□□ -0.39
COPS3-214ENST00000577246 PTK6Q13882 451 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 ARHGAP19Q14CB8 494 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 HKDC1Q2TB90 917 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 MINDY4Q4G0A6 757 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 PAQR7Q86WK9 346 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 VSTM4Q8IW00 320 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 KRT222Q8N1A0 295 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 MPP5Q8N3R9 675 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 M1APQ8TC57 530 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 CYTH2Q99418 400 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 EBNA1BP2Q99848 306 aaKnown RBP12.63□□□□□ -0.39
COPS3-214ENST00000577246 VN1R1Q9GZP7 353 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 TSPAN10Q9H1Z9 355 aaPredicted RBP12.63□□□□□ -0.39
COPS3-214ENST00000577246 FAM114A2Q9NRY5 505 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 SLC2A6Q9UGQ3 507 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
COPS3-214ENST00000577246 AKR1B15C9JRZ8 316 aaPredicted RBP12.62□□□□□ -0.39
COPS3-214ENST00000577246 E7EVH7 732 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 FOXS1O43638 330 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 ERGP11308 486 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 ZNF24P17028 368 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 ATP5DP30049 168 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 CD96P40200 585 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 CCSMST1Q4G0I0 132 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 ANKRD20A4Q4UJ75 823 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 DOLPP1Q86YN1 238 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 SIAH3Q8IW03 269 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms