RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 FBXO8Q9NRD0 319 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 SLC17A7Q9P2U7 560 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 SERTAD3Q9UJW9 196 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 ANGPTL2Q9UKU9 493 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 PLCL2Q9UPR0 1127 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 ASB1Q9Y576 335 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 PCDHGA8Q9Y5G5 932 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 OR2A25A4D2G3 310 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 LRRC14BA6NHZ5 514 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 E7EQ34 232 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 SUPT7LO94864 414 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 C1GALT1C1LP0DN25 315 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 CXCR2P25025 360 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 ETV5P41161 510 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 PRKAA2P54646 552 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 CSNK1G2P78368 415 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 NFKB2Q00653 900 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 MEF2AQ02078 507 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 CYP4F3Q08477 520 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 ASPHQ12797 758 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 IL11RAQ14626 422 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 HIST2H2ACQ16777 129 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 XKR6Q5GH73 641 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 HIST2H2AA3Q6FI13 130 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 ZNF425Q6IV72 752 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 NXPE4Q6UWF7 544 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 BPHLQ86WA6 291 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 PPP1R3BQ86XI6 285 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 MCATQ8IVS2 390 aaKnown RBP13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 GPR135Q8IZ08 494 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 DNAJC22Q8N4W6 341 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 ABHD11Q8NFV4 315 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 USP7Q93009 1102 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 RERGQ96A58 199 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 ARL8AQ96BM9 186 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 CTRCQ99895 268 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 ZFYVE21Q9BQ24 234 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 SELENOSQ9BQE4 189 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 SLC7A5P2Q9GIP4 190 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 SIDT1Q9NXL6 827 aaKnown RBP13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 COPG2Q9UBF2 871 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 KLK4Q9Y5K2 254 aa13.92□□□□□ -0.18
NPLOC4-218ENST00000574964 IGKV1-8A0A0C4DH67 115 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 PMS2P1A4D2B8 440 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 G3V2L1 256 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 HAT1O14929 419 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 TM9SF1O15321 606 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 TYROBPO43914 113 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 NRP2O60462 931 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 CTSVO60911 334 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 SASH3O75995 380 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 EIF2S1P05198 315 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 EZRP15311 586 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 IMPDH1P20839 514 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 VARSP26640 1264 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 ITGA1P56199 1179 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 RPS15AP62244 130 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 HERVK_113P63132 956 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 CHIT1Q13231 466 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 CAMK2BQ13554 666 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 RBBP5Q15291 538 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 RBBP7Q16576 425 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 PAGE2BQ5JRK9 111 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 CFAP157Q5JU67 520 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 GOLGA7Q7Z5G4 137 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 MYLK4Q86YV6 388 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 PLD3Q8IV08 490 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 KRT78Q8N1N4 520 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 CCNYL1Q8N7R7 359 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 BMPERQ8N8U9 685 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 ANKRD42Q8N9B4 389 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 OR8K5Q8NH50 307 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 TLCD1Q96CP7 247 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 ZNF501Q96CX3 271 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 ATP6V1G3Q96LB4 118 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 TEFMQ96QE5 360 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 ZPBPQ9BS86 351 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 ERVK-6Q9BXR3 956 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 ASPSCR1Q9BZE9 553 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 IPPKQ9H8X2 491 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 ACTR8Q9H981 624 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 APMAPQ9HDC9 416 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 SEMA4BQ9NPR2 832 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 WASF3Q9UPY6 502 aa13.91□□□□□ -0.18
NPLOC4-218ENST00000574964 SDK2Q58EX2 2172 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 A0A1W2PNU3 283 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 MED19A0JLT2 244 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 FEZF1A0PJY2 475 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 E2F3O00716 465 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 PRPF4O43172 522 aaKnown RBP eCLIP13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 OR1F1O43749 312 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 SRPX2O60687 465 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 OR2B3O76000 313 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 ZWINTO95229 277 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 RPS17P08708 135 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 FGF5P12034 268 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 NEFHP12036 1026 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 CCNG1P51959 295 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 CDH13P55290 713 aa13.9□□□□□ -0.18
NPLOC4-218ENST00000574964 VSX2P58304 361 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms