RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 BCL7BQ9BQE9 202 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 FAM83CQ9BQN1 747 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 BBS2Q9BXC9 721 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 SLC46A2Q9BY10 475 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 SMG9Q9H0W8 520 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 RIBC2Q9H4K1 309 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 ERVK-18Q9QC07 812 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 VPS29Q9UBQ0 182 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 SLCO3A1Q9UIG8 710 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 B3GNT3Q9Y2A9 372 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 A0A1W2PRU2 124 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 UPK3BL1B0FP48 263 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 UPK3BL2E5RIL1 263 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 J3QRK9 145 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 hCG_2039718K7EN88 272 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 TGM5O43548 720 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 PSIP1O75475 530 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 COX7A2P14406 83 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF30P17039 623 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 HOXA9P31269 272 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 VIPR1P32241 457 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 DCDC1P59894 354 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 POLR2LP62875 67 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 VLDLRP98155 873 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 SIM2Q14190 667 aaPredicted RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 NPTX1Q15818 432 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 XKR6Q5GH73 641 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 C16orf87Q6PH81 154 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 DCDC5Q6ZRR9 648 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 HSD11B1LQ7Z5J1 315 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 CLECL1Q8IZS7 167 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 PARP8Q8N3A8 854 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 ABHD11Q8NFV4 315 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 METTL2AQ96IZ6 378 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 HSH2DQ96JZ2 352 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 CCDC90BQ9GZT6 254 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 CHST8Q9H2A9 424 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 FAM83DQ9H4H8 585 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 NDRG4Q9ULP0 352 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 RUVBL1Q9Y265 456 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 TDRKHQ9Y2W6 561 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 TPRKBQ9Y3C4 175 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 PCDHB11Q9Y5F2 797 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 PCDHGA10Q9Y5H3 936 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 SOBPA7XYQ1 873 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 ARHGEF33A8MVX0 844 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 CFAP99D6REC4 459 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 E7EQ34 232 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 H0YIV9 168 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 DPM1O60762 260 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 SULT1C4O75897 302 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 DIRAS1O95057 198 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 GABARAPO95166 117 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 CPSF4O95639 269 aaKnown RBP8.65□□□□□ -1.02
NCBP3-204ENST00000574911 LAMP1P11279 417 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 CYP2A6P11509 494 aaPredicted RBP8.65□□□□□ -1.02
NCBP3-204ENST00000574911 FMO3P31513 532 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 ATN1P54259 1190 aaPredicted RBP8.65□□□□□ -1.02
NCBP3-204ENST00000574911 ITGA1P56199 1179 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 SLC35A2P78381 396 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 RAE1P78406 368 aaKnown RBP8.65□□□□□ -1.02
NCBP3-204ENST00000574911 PCDH1Q08174 1060 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 VEZF1Q14119 521 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 DOC2AQ14183 400 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 IQCCQ4KMZ1 466 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 GRHL2Q6ISB3 625 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 Q6ZVU0 165 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 VTCN1Q7Z7D3 282 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 GALNT10Q86SR1 603 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 ZBTB46Q86UZ6 589 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 GPR65Q8IYL9 337 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 OR2A12Q8NGT7 310 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 CHPT1Q8WUD6 406 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 SNRNP27Q8WVK2 155 aaKnown RBP8.65□□□□□ -1.02
NCBP3-204ENST00000574911 ASZ1Q8WWH4 475 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 SCAMP4Q969E2 229 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 YIPF6Q96EC8 236 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 SPATA9Q9BWV2 254 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 PDP1Q9P0J1 537 aaPredicted RBP8.65□□□□□ -1.02
NCBP3-204ENST00000574911 BTBD3Q9Y2F9 522 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 GMPPBQ9Y5P6 360 aa8.65□□□□□ -1.02
NCBP3-204ENST00000574911 MYO1GB0I1T2 1018 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 SCAMP2O15127 329 aaKnown RBP8.65□□□□□ -1.03
NCBP3-204ENST00000574911 LRG1P02750 347 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 CTSAP10619 480 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 CYP4B1P13584 511 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 HSD3B1P14060 373 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 NR4A1P22736 598 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 FSHRP23945 695 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 HSD3B2P26439 372 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 NR1D2Q14995 579 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 SF1Q15637 639 aaKnown RBP8.65□□□□□ -1.03
NCBP3-204ENST00000574911 FAHD1Q6P587 224 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 BRAT1Q6PJG6 821 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 HORMAD1Q86X24 394 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 TMEM25Q86YD3 366 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 CENPSQ8N2Z9 138 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 TRAM1L1Q8N609 369 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms