RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ZC3H7AQ8IWR0 971 aaKnown RBP9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 ARHGEF39Q8N4T4 335 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 ACRBPQ8NEB7 543 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 RERGQ96A58 199 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 HES6Q96HZ4 224 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 BIRC8Q96P09 236 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 OR2A5Q96R48 311 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 TUBB6Q9BUF5 446 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 DRC3Q9H069 523 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 SYNPO2LQ9H987 977 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 TREX1Q9NSU2 369 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 UTP6Q9NYH9 597 aaKnown RBP9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 MKL2Q9ULH7 1088 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 ZNF148Q9UQR1 794 aa9.36□□□□□ -0.91
TRAPPC1-205ENST00000572656 A0A0A6YYC8 382 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 A0A0U1RQJ8 604 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 ZNF839A8K0R7 811 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 ARHGEF33A8MVX0 844 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 H3BMM5 538 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 I3L1I5 382 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 MYO1CO00159 1063 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 FOXS1O43638 330 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 SLC19A2O60779 497 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 CCNDBP1O95273 360 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 SNRPB2P08579 225 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 C8orf89P0DMQ9 161 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 EZRP15311 586 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 AGAP20933 346 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 FMO4P31512 558 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 HSD17B2P37059 387 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 EFNA3P52797 238 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 SESN2P58004 480 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 CRADDP78560 199 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 SRSF11Q05519 484 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 ZNF33BQ06732 778 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 PRDX1Q06830 199 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 FAM53BQ14153 422 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 SYT16Q17RD7 645 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 ZNF766Q5HY98 468 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 ICE2Q659A1 982 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 ZNF425Q6IV72 752 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 MRNIPQ6NTE8 343 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 SUSD1Q6UWL2 747 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 NEK10Q6ZWH5 1172 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 SDCCAG8Q86SQ7 713 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 KIAA1328Q86T90 577 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 PRUNE1Q86TP1 453 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 CCDC89Q8N998 374 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 C1orf54Q8WWF1 131 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 METTL21AQ8WXB1 218 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 LPGAT1Q92604 370 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 TRIM8Q9BZR9 551 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 IL22Q9GZX6 179 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 FAM114A2Q9NRY5 505 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 PAK5Q9P286 719 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 TAC3Q9UHF0 121 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 SH3BGRL2Q9UJC5 107 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 TSR3Q9UJK0 312 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 PCDHGB6Q9Y5F9 930 aa9.35□□□□□ -0.91
TRAPPC1-205ENST00000572656 A8MUI8 341 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 AP3B1O00203 1094 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 PFDN6O15212 129 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 NIPSNAP2O75323 286 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 PSIP1O75475 530 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 WISP2O76076 250 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 VAPBO95292 243 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 ESR1P03372 595 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 CATP04040 527 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 CYC1P08574 325 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 ESRRAP11474 423 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 CHRM3P20309 590 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 NMBRP28336 390 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 RPL22P35268 128 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 AVPR1BP47901 424 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 NPY2RP49146 381 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 SMSP52788 366 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 PNLIPRP1P54315 467 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 ADARP55265 1226 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 ABATP80404 500 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 ADORA2A-AS1P86434 159 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 PMP22Q01453 160 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 KIF5AQ12840 1032 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 TSTA3Q13630 321 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 C3AR1Q16581 482 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 NDUFA9Q16795 377 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 TYSND1Q2T9J0 566 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 ACSBG2Q5FVE4 666 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 RNF187Q5TA31 235 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 PLAG1Q6DJT9 500 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 CPEB2Q7Z5Q1 589 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 SLC13A5Q86YT5 568 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 TXLNBQ8N3L3 684 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 OTUD6BQ8N6M0 293 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 AMER2Q8N7J2 671 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 THAP3Q8WTV1 239 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 ZNF354BQ96LW1 612 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 TCF12Q99081 682 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 CYTH2Q99418 400 aa9.34□□□□□ -0.91
TRAPPC1-205ENST00000572656 PKP4Q99569 1192 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms