RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 NPIPB15A6NHN6 443 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 PRSS47A8MTI9 375 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 K7ENM7 598 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 CBX6O95503 412 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 SCGB1D1O95968 90 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 NUDT3O95989 172 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 OR52Z1P0C646 297 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 FDPSP14324 419 aaKnown RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 LHX1P48742 406 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 ZNF177Q13360 481 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 C1orf61Q13536 156 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 STIM1Q13586 685 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 TBCEQ15813 527 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 IL17AQ16552 155 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 DEFB133Q30KQ1 61 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 SLC45A4Q5BKX6 768 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 C10orf120Q5SQS8 335 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 ATP1A1-AS1Q5TC04 95 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 ISM2Q6H9L7 571 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 OR6B2Q6IFH4 312 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 CAPRIN2Q6IMN6 1127 aaKnown RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 CFAP161Q6P656 301 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 IL20RBQ6UXL0 311 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 LEKR1Q6ZMV7 388 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 FAM57BQ71RH2 274 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 B4GALNT4Q76KP1 1039 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 CHST9Q7L1S5 443 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 PRIMA1Q86XR5 153 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 AADATQ8N5Z0 425 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 IQUBQ8NA54 791 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 C11orf65Q8NCR3 313 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 ANKRD20A12PQ8NF67 263 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 OR4C6Q8NH72 309 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 WFDC5Q8TCV5 224 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 WIPF2Q8TF74 440 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 FAM118BQ9BPY3 351 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 CALN1Q9BXU9 219 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 MTMR12Q9C0I1 747 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 CCSER1Q9C0I3 900 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 TMEM245Q9H330 911 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 SNX25Q9H3E2 840 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 ACTR5Q9H9F9 607 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 BRF2Q9HAW0 419 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 ABCB8Q9NUT2 735 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 TBC1D7Q9P0N9 293 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 HSPB7Q9UBY9 170 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 LSM7Q9UK45 103 aaKnown RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 CDH9Q9ULB4 789 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 COX11Q9Y6N1 276 aa5.29□□□□□ -1.56
SF3B3-214ENST00000572365 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 TRBV5-7A0A0A0MS05 114 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 TEX13CA0A0J9YWL9 993 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 DPPA5A6NC42 116 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 LRRC72A6NJI9 287 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 H0YHG0 523 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 SCAMP1O15126 338 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 TGFB1I1O43294 461 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 DUX1O43812 170 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 BMP5P22003 454 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 CERS1P27544 350 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 HLA-FP30511 346 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 ATP5C1P36542 298 aaKnown RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 PPP3CCP48454 512 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 SGSHP51688 502 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 PDX1P52945 283 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 EIF3BP55884 814 aaKnown RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 GSCP56915 257 aaPredicted RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 MAP3K7CLP57077 242 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 IRX1P78414 480 aaPredicted RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 CCL7P80098 99 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 PKP1Q13835 747 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 DEFB109BQ30KR1 87 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 CEP78Q5JTW2 689 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 SNX30Q5VWJ9 437 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 PAPD7Q5XG87 772 aaKnown RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 ZNF776Q68DI1 518 aaPredicted RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 PAQR9Q6ZVX9 377 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 RD3Q7Z3Z2 195 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 CPLX4Q7Z7G2 160 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 ADIPOR2Q86V24 386 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 IGFN1Q86VF2 1251 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 CCDC25Q86WR0 208 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 ADGRG3Q86Y34 549 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 TICAM1Q8IUC6 712 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 CD302Q8IX05 232 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 STK40Q8N2I9 435 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 TMEM86AQ8N2M4 240 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 OTUD6BQ8N6M0 293 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 Q8N9G6 341 aaPredicted RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 DNAAF1Q8NEP3 725 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 OR5B17Q8NGF7 314 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 OR2T34Q8NGX1 318 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 C9orf43Q8TAL5 461 aaPredicted RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 TMEM170AQ8WVE7 144 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 POMGNT1Q8WZA1 660 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 NDRG1Q92597 394 aaKnown RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 KLHL29Q96CT2 875 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 HPDLQ96IR7 371 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 ZNF560Q96MR9 790 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 SORCS2Q96PQ0 1159 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms