RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PTRHD1Q6GMV3 140 aaKnown RBP18.8■□□□□ 0.6
CCDC40-206ENST00000572083 LRRC8BQ6P9F7 803 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 LANCL3Q6ZV70 420 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 LINC00523Q86TU6 105 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 CNGA4Q8IV77 575 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 ALG3Q92685 438 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 TMEM121Q9BTD3 319 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 MARCH4Q9P2E8 410 aaPredicted RBP18.8■□□□□ 0.6
CCDC40-206ENST00000572083 NPIPA5E9PKD4 350 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 PRMT5O14744 637 aaPredicted RBP18.79■□□□□ 0.6
CCDC40-206ENST00000572083 FOXS1O43638 330 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 PPARGP37231 505 aaPredicted RBP18.79■□□□□ 0.6
CCDC40-206ENST00000572083 EMP3P54852 163 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 CSNK1G2P78368 415 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 ALDH6A1Q02252 535 aaKnown RBP18.79■□□□□ 0.6
CCDC40-206ENST00000572083 ACVR1Q04771 509 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 TUBA3CQ13748 450 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 TUBA3EQ6PEY2 450 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 SUSD1Q6UWL2 747 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 C3P1Q6ZMU1 363 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 MEX3BQ6ZN04 569 aaKnown RBP18.79■□□□□ 0.6
CCDC40-206ENST00000572083 AGAP11Q8TF27 550 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 PLCD4Q9BRC7 762 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 DRC3Q9H069 523 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 MRPS30Q9NP92 439 aaKnown RBP18.79■□□□□ 0.6
CCDC40-206ENST00000572083 CATSPERZQ9NTU4 200 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 NPIPA1Q9UND3 350 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 PCDHA13Q9Y5I0 950 aa18.79■□□□□ 0.6
CCDC40-206ENST00000572083 IGKV1-8A0A0C4DH67 115 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 MLYCDO95822 493 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 GAS8O95995 478 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 PTMAP06454 111 aaKnown RBP18.78■□□□□ 0.6
CCDC40-206ENST00000572083 ABOP16442 354 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 CCNFP41002 786 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 CETN2P41208 172 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 GRIA1P42261 906 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 HSF1Q00613 529 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 TSTA3Q13630 321 aaPredicted RBP18.78■□□□□ 0.6
CCDC40-206ENST00000572083 NAA25Q14CX7 972 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 KRTCAP3Q53RY4 240 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 AARS2Q5JTZ9 985 aaKnown RBP18.78■□□□□ 0.6
CCDC40-206ENST00000572083 ACER2Q5QJU3 275 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 MFSD4BQ5TF39 518 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 PPP1R21Q6ZMI0 780 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 SHISA5Q8N114 240 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 ARHGEF39Q8N4T4 335 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 MDS2Q8NDY4 140 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 METTL21AQ8WXB1 218 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 FRMD6Q96NE9 622 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 VN1R1Q9GZP7 353 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 ENKD1Q9H0I2 346 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 SPATA7Q9P0W8 599 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 ANAPC5Q9UJX4 755 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 PCDHGB6Q9Y5F9 930 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 MRFAP1Q9Y605 127 aa18.78■□□□□ 0.6
CCDC40-206ENST00000572083 AKR1B15C9JRZ8 316 aaPredicted RBP18.77■□□□□ 0.6
CCDC40-206ENST00000572083 P2RX6O15547 441 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 EEF1DP29692 281 aaKnown RBP18.77■□□□□ 0.6
CCDC40-206ENST00000572083 SNRPNP63162 240 aaKnown RBP18.77■□□□□ 0.6
CCDC40-206ENST00000572083 OR1C1Q15619 314 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 GARNL3Q5VVW2 1013 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 SPINK14Q6IE38 97 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 OTOAQ7RTW8 1153 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 PAQR7Q86WK9 346 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 RERGQ96A58 199 aaPredicted RBP18.77■□□□□ 0.6
CCDC40-206ENST00000572083 MRFAP1L1Q96HT8 127 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 ZNF354BQ96LW1 612 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 FOPNLQ96NB1 174 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 PANX3Q96QZ0 392 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 P2RY12Q9H244 342 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 GNPTGQ9UJJ9 305 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 RIMKLBQ9ULI2 386 aa18.77■□□□□ 0.6
CCDC40-206ENST00000572083 ASPDHA6ND91 283 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 GOLGA6L9A6NEM1 432 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 MAN1A2O60476 641 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 PHF2O75151 1096 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 STATHP02808 62 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 ADRA1DP25100 572 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 RPA3P35244 121 aaPredicted RBP18.76■□□□□ 0.59
CCDC40-206ENST00000572083 MINDY4Q4G0A6 757 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 PLAG1Q6DJT9 500 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 CPEB2Q7Z5Q1 589 aaKnown RBP18.76■□□□□ 0.59
CCDC40-206ENST00000572083 CRLF3Q8IUI8 442 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 SIAH3Q8IW03 269 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 ACBD4Q8NC06 268 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 MAGEC3Q8TD91 643 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 CA5BP1Q8WTZ4 195 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 SDCCAG3Q96C92 435 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 SCMH1Q96GD3 660 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 OR2A5Q96R48 311 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 NPAS2Q99743 824 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 UTP23Q9BRU9 249 aaKnown RBP18.76■□□□□ 0.59
CCDC40-206ENST00000572083 KCNK13Q9HB14 408 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 TAC3Q9UHF0 121 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 PCYOX1Q9UHG3 505 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 TCAF1Q9Y4C2 921 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 SCN2AQ99250 2005 aa18.76■□□□□ 0.59
CCDC40-206ENST00000572083 FANCGO15287 622 aa18.75■□□□□ 0.59
CCDC40-206ENST00000572083 CD96P40200 585 aa18.75■□□□□ 0.59
CCDC40-206ENST00000572083 TTPAP49638 278 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms