RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 EBLN1P0CF75 366 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 GIMD1P0DJR0 217 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 PCNAP12004 261 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 MYF5P13349 255 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 HGFP14210 728 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 EZRP15311 586 aaKnown RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 PNLIPP16233 465 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 CKMT2P17540 419 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 HRH2P25021 359 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 LSP1P33241 339 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 HNF4AP41235 474 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 KRT6CP48668 564 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 HK2P52789 917 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR1D5P58170 312 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 NHLH1Q02575 133 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 GALNT1Q10472 559 aaPredicted RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 IFT88Q13099 833 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 TRAF3Q13114 568 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SPIDRQ14159 915 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLBPQ14493 270 aaKnown RBP eCLIP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 NR1D2Q14995 579 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC5A12Q1EHB4 618 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 UNC50Q53HI1 259 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 CCDC157Q569K6 752 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 ARL13AQ5H913 290 aaPredicted RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 TBCELQ5QJ74 424 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 STPG1Q5TH74 334 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 DDIASQ8IXT1 998 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 KLHDC8AQ8IYD2 350 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 ADGRF3Q8IZF5 1079 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 CHCHD4Q8N4Q1 142 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 CDYL2Q8N8U2 506 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 DCBLD1Q8N8Z6 715 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 C19orf47Q8N9M1 422 aaKnown RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 LMNTD1Q8N9Z9 388 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR2L3Q8NG85 312 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR4F6Q8NGB9 312 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR52B6Q8NGF0 335 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 WDR48Q8TAF3 677 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 AGAP11Q8TF27 550 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 NCSTNQ92542 709 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 NEIL2Q969S2 332 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 TGM7Q96PF1 710 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 GFM1Q96RP9 751 aaKnown RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 DPYSL5Q9BPU6 564 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 PLCD4Q9BRC7 762 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 MENTQ9BUN1 341 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 TRIM55Q9BYV6 548 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC29A3Q9BZD2 475 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 EHD1Q9H4M9 534 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 CCDC134Q9H6E4 229 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 PELI2Q9HAT8 420 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 PARD6AQ9NPB6 346 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 IRAK4Q9NWZ3 460 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SPHK1Q9NYA1 384 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 FAM53CQ9NYF3 392 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 ANKMY1Q9P2S6 941 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 MARCOQ9UEW3 520 aaPredicted RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 KLHL3Q9UH77 587 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 TRPS1Q9UHF7 1281 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 POMT2Q9UKY4 750 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SNX7Q9UNH6 387 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SNX6Q9UNH7 406 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 RAP2CQ9Y3L5 183 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 ASB1Q9Y576 335 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 LRP4O75096 1905 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 TRIOO75962 3097 aa6.34□□□□□ -1.4
CTDNEP1-204ENST00000570484 PCDH15Q96QU1 1955 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 MN1Q10571 1320 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 A0A1W2PPV9 198 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 EME2A4GXA9 379 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 TRPC5OSA6NMA1 111 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR7A17O14581 309 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CDX4O14627 284 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 FFAR3O14843 346 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 AZIN1O14977 448 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 GPR42O15529 346 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 TNFSF14O43557 240 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 SH3BP5O60239 455 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 MAN1A2O60476 641 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 EDF1O60869 148 aaKnown RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 SNNO75324 88 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 RFPL3O75679 317 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR4F21O95013 312 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CPNE6O95741 557 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 C1GALT1C1LP0DN25 315 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 KITP10721 976 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 UROSP10746 265 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CD59P13987 128 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 JUPP14923 745 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 NPPBP16860 134 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 MAGP20916 626 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 MPSTP25325 297 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 GSTM2P28161 218 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 PEBP1P30086 187 aaKnown RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 SERPINB1P30740 379 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CCR10P46092 362 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 RPL14P50914 215 aaKnown RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 GFERP55789 205 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 RPS15AP62244 130 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms