RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 FAM71BQ8TC56 605 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 MAPK15Q8TD08 544 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 MR1Q95460 341 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CIDECQ96AQ7 238 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 CXorf40BQ96DE9 158 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 HSPA12BQ96MM6 686 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ZFYVE21Q9BQ24 234 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ABCB8Q9NUT2 735 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SELENONQ9NZV5 590 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 MPP6Q9NZW5 540 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SCOCQ9UIL1 159 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 DMRT1Q9Y5R6 373 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CFAP54Q96N23 3096 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 A0A1B0GTQ1 180 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ARGFXA6NJG6 315 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 KCNK3O14649 394 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 GIPC1O14908 333 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CHEK2O96017 543 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 H2AFZP0C0S5 128 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 TCF4P15884 667 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ATP6V1C1P21283 382 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CCR10P46092 362 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 GSTM5P46439 218 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CARSP49589 748 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 GALK1P51570 392 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 SLC5A3P53794 718 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 CDH4P55283 916 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 EIF3BP55884 814 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 ELAVL3Q14576 367 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 UAP1Q16222 522 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 MYLK3Q32MK0 819 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PCID2Q5JVF3 399 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ERMARDQ5T6L9 678 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 TXNDC8Q6A555 127 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 H2AFVQ71UI9 128 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ADGRD2Q7Z7M1 963 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ARMC8Q8IUR7 673 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ZNF781Q8N8C0 355 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 TNFRSF14Q92956 283 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PTCD3Q96EY7 689 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 CMKLR1Q99788 373 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 FOXQ1Q9C009 403 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 OR51B6Q9H340 312 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 C12orf65Q9H3J6 166 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 ACTR5Q9H9F9 607 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 CCM2LQ9NUG4 571 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 TAS2R10Q9NYW0 307 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PTTG3PQ9NZH4 202 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 PDP1Q9P0J1 537 aaPredicted RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 KLHL14Q9P2G3 628 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 ZNF229Q9UJW7 825 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 EXOGQ9Y2C4 368 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 DNAJC16Q9Y2G8 782 aa6.47□□□□□ -1.37
SMG1-217ENST00000569764 WBP11Q9Y2W2 641 aaKnown RBP6.47□□□□□ -1.37
SMG1-217ENST00000569764 TNFSF14O43557 240 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 TUSC2O75896 110 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 SUN1O94901 812 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 NTRK1P04629 796 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 FABP1P07148 127 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 CD27P26842 260 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 MC5RP33032 325 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 GJA4P35212 333 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 VIPR2P41587 438 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 SLC1A3P43003 542 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 CDK18Q07002 472 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 UBAP2LQ14157 1087 aaKnown RBP6.46□□□□□ -1.37
SMG1-217ENST00000569764 SSX2Q16385 188 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 BCL7AQ4VC05 210 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 ARSJQ5FYB0 599 aaPredicted RBP6.46□□□□□ -1.37
SMG1-217ENST00000569764 CCNI2Q6ZMN8 369 aaPredicted RBP6.46□□□□□ -1.37
SMG1-217ENST00000569764 ZNF679Q8IYX0 411 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 KDF1Q8NAX2 398 aaPredicted RBP6.46□□□□□ -1.37
SMG1-217ENST00000569764 POGLUT1Q8NBL1 392 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 TRPV3Q8NET8 790 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 OR4A15Q8NGL6 344 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 DTX3LQ8TDB6 740 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 DPF1Q92782 380 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 PGM2Q96G03 612 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 HHIPQ96QV1 700 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 CISHQ9NSE2 258 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 PKP3Q9Y446 797 aa6.46□□□□□ -1.37
SMG1-217ENST00000569764 ZNF638Q14966 1978 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 CPED1A4D0V7 1026 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PDZK1P1A8MUH7 402 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PROB1E7EW31 1015 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 MATN2O00339 956 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 RAD51CO43502 376 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 SERPINF2P08697 491 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 STAG3L2P0CL84 134 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 UNGP13051 313 aaPredicted RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 HLA-EP13747 358 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 CCDC130P13994 396 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 POU1F1P28069 291 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 OR1E1P30953 314 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 WASP42768 502 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 ACADVLP49748 655 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 CLK3P49761 638 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 ECT2LQ008S8 904 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 POU4F2Q12837 409 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 NR0B2Q15466 257 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms