RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FASTKD1Q53R41 847 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 AARS2Q5JTZ9 985 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 FCRLBQ6BAA4 426 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 LRRC8BQ6P9F7 803 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 TUBA3EQ6PEY2 450 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 LINC00523Q86TU6 105 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 KRT222Q8N1A0 295 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 GHDCQ8N2G8 530 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 AMER2Q8N7J2 671 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 FAM71DQ8N9W8 422 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 TMEM178AQ8NBL3 297 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 FAM98AQ8NCA5 519 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 OR4L1Q8NH43 312 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 MAGEC3Q8TD91 643 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 RERGQ96A58 199 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 SCMH1Q96GD3 660 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 FOPNLQ96NB1 174 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 SIGLEC12Q96PQ1 595 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 PANX3Q96QZ0 392 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 PLCD4Q9BRC7 762 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 UTP23Q9BRU9 249 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 TRIM51Q9BSJ1 452 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 ACAT2Q9BWD1 397 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 COQ3Q9NZJ6 369 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 SPATA7Q9P0W8 599 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 C19orf25Q9UFG5 118 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 RIMKLBQ9ULI2 386 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 PPT2Q9UMR5 302 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 NFS1Q9Y697 457 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 A0A0A6YYC8 382 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 KRT87PA6NCN2 255 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 I3L1I5 382 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 PRRG2O14669 202 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 KPNA5O15131 536 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 FOXS1O43638 330 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 ASNA1O43681 348 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 NADKO95544 446 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 CETN2P41208 172 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 EFNA3P52797 238 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 YBX1P67809 324 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 PRAMEP78395 509 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 ACVR1Q04771 509 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 CDH17Q12864 832 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 FASTKQ14296 549 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 OR1C1Q15619 314 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 MEP1AQ16819 746 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 SYT16Q17RD7 645 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 PTRHD1Q6GMV3 140 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 H3F3CQ6NXT2 135 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 ZNF534Q76KX8 674 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 OTOAQ7RTW8 1153 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 CPEB2Q7Z5Q1 589 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 DOLPP1Q86YN1 238 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 SIAH3Q8IW03 269 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 ARHGEF39Q8N4T4 335 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 HORMAD2Q8N7B1 307 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 DNAAF3Q8N9W5 541 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 OR52K1Q8NGK4 314 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 OR6P1Q8NGX9 317 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 DMRTA2Q96SC8 542 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 HES7Q9BYE0 225 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 VN1R1Q9GZP7 353 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 KCNK13Q9HB14 408 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 MRPS30Q9NP92 439 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 ANKRD10Q9NXR5 420 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 UTP6Q9NYH9 597 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 SLC2A6Q9UGQ3 507 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 ANAPC5Q9UJX4 755 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 RUVBL2Q9Y230 463 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 CPAMD8Q8IZJ3 1885 aa11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 ZNF469Q96JG9 3925 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-209ENST00000568569 IGHV3-20A0A0C4DH32 117 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 A0A0U1RQJ8 604 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 SYCE3A1L190 88 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 TXNDC9O14530 226 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 CBFA2T2O43439 604 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 SUN1O94901 812 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 CD99P14209 185 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 PKMP14618 531 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 EZRP15311 586 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 ZNF24P17028 368 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 IGFBP2P18065 325 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 CD96P40200 585 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 MAGEA1P43355 309 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 TTPAP49638 278 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 MAT1AQ00266 395 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 FAM53BQ14153 422 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 SEMA3AQ14563 771 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 EXT1Q16394 746 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 NDUFA9Q16795 377 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 MINDY4Q4G0A6 757 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 TSTD2Q5T7W7 516 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 SPINK14Q6IE38 97 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 C3P1Q6ZMU1 363 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 LANCL3Q6ZV70 420 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 GALNTL5Q7Z4T8 443 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 PEX13Q92968 403 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 OR2A5Q96R48 311 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 CYTH2Q99418 400 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms