RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 PCDH1Q08174 1060 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 TUBB3Q13509 450 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 E2F2Q14209 437 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 PCLAFQ15004 111 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 TTMPQ5BVD1 217 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 METTL2BQ6P1Q9 378 aaKnown RBP17.25■□□□□ 0.35
COMMD4-222ENST00000568034 NXPE4Q6UWF7 544 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 PLD3Q8IV08 490 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 TEX9Q8N6V9 391 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 SNX31Q8N9S9 440 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 RDH11Q8TC12 318 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 ZNF285Q96NJ3 590 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 NSUN5Q96P11 429 aaKnown RBP17.25■□□□□ 0.35
COMMD4-222ENST00000568034 TMEM121BQ9BXQ6 578 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-222ENST00000568034 STMN4Q9H169 189 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-222ENST00000568034 PELI2Q9HAT8 420 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 ZBTB26Q9HCK0 441 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 ASCL3Q9NQ33 180 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 FGF21Q9NSA1 209 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 COPG2Q9UBF2 871 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 SNX7Q9UNH6 387 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 TRABD2BA6NFA1 517 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 GOLGA6L10A6NI86 522 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 DXOO77932 396 aaKnown RBP17.24■□□□□ 0.35
COMMD4-222ENST00000568034 TNFSF15O95150 251 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 MYL2P10916 166 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 FGF5P12034 268 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 GNAZP19086 355 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 CD22P20273 847 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 VARSP26640 1264 aaKnown RBP17.24■□□□□ 0.35
COMMD4-222ENST00000568034 CCR8P51685 355 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 MAPK10P53779 464 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 MAGOHP61326 146 aaKnown RBP17.24■□□□□ 0.35
COMMD4-222ENST00000568034 HERVK_113P63132 956 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 RELAQ04206 551 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 FOXM1Q08050 763 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 UNC50Q53HI1 259 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 ZNF678Q5SXM1 525 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 TMTC4Q5T4D3 741 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 FRMPD2BQ6IN97 320 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 FOXR1Q6PIV2 292 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 RPS27LQ71UM5 84 aaKnown RBP17.24■□□□□ 0.35
COMMD4-222ENST00000568034 GOLGA7Q7Z5G4 137 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 ADCK2Q7Z695 626 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 SLC22A9Q8IVM8 553 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 ZNF740Q8NDX6 193 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 OR1L3Q8NH93 324 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 ZNF483Q8TF39 744 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-222ENST00000568034 L3HYPDHQ96EM0 354 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 MOCOSQ96EN8 888 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 WDR34Q96EX3 536 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 OR2A5Q96R48 311 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 CTRCQ99895 268 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 ZFYVE21Q9BQ24 234 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 SARGQ9BW04 601 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 ERVK-6Q9BXR3 956 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 IQCGQ9H095 443 aaKnown RBP17.24■□□□□ 0.35
COMMD4-222ENST00000568034 ACSS2Q9NR19 701 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 ENAMQ9NRM1 1142 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 SLC39A1Q9NY26 324 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 PLCL2Q9UPR0 1127 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 PCDHGA3Q9Y5H0 932 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 B3GALT1Q9Y5Z6 326 aa17.24■□□□□ 0.35
COMMD4-222ENST00000568034 MDC1Q14676 2089 aaKnown RBP17.24■□□□□ 0.35
COMMD4-222ENST00000568034 A0A0J9YVX5 310 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 FEZF1A0PJY2 475 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 CDRT15L2A8MXV6 281 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 TMEM150CB9EJG8 249 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 OR7A17O14581 309 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 TIAF1O95411 115 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 C1GALT1C1LP0DN25 315 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 CPA3P15088 417 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 EZRP15311 586 aaKnown RBP17.23■□□□□ 0.35
COMMD4-222ENST00000568034 BCL6P41182 706 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 MEF2AQ02078 507 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-222ENST00000568034 CYP4F3Q08477 520 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 GTF2H2Q13888 395 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 ATG9BQ674R7 924 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 GTF2H2CQ6P1K8 395 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 MCATQ8IVS2 390 aaKnown RBP17.23■□□□□ 0.35
COMMD4-222ENST00000568034 CCDC63Q8NA47 563 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 USP7Q93009 1102 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 SLC46A1Q96NT5 459 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 TAAR9Q96RI9 348 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 DDA1Q9BW61 102 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 CAPS2Q9BXY5 557 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 EHD1Q9H4M9 534 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 OXSMQ9NWU1 459 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 GEMIN8Q9NWZ8 242 aaKnown RBP17.23■□□□□ 0.35
COMMD4-222ENST00000568034 FOXJ2Q9P0K8 574 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 MID2Q9UJV3 735 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 ANGPTL2Q9UKU9 493 aa17.23■□□□□ 0.35
COMMD4-222ENST00000568034 CEP295Q9C0D2 2601 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 LOC105369274A0A096LPK9 316 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 LOC102723532A0A0G2JNH3 316 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 POLR1CO15160 346 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-222ENST00000568034 LCMT2O60294 686 aaKnown RBP17.22■□□□□ 0.35
COMMD4-222ENST00000568034 BRINP1O60477 761 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 WFS1O76024 890 aa17.22■□□□□ 0.35
COMMD4-222ENST00000568034 DHRS4L1P0CG22 281 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms