RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	BDH2	Q9BUT1	245 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	FICD	Q9BVA6	458 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	CBLC	Q9ULV8	474 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	IGLV3-16	A0A075B6K0	115 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	C5orf60	A6NFR6	353 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	CDK2AP1	O14519	115 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	ACRV1	P26436	265 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	UQCRC1	P31930	480 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	CD68	P34810	354 aa	Predicted RBP	12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	SLC26A3	P40879	764 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	TAS2R50	P59544	299 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	PLOD1	Q02809	727 aa	Predicted RBP	12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	GPR33	Q49SQ1	333 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	FIGN	Q5HY92	759 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	EMC4	Q5J8M3	183 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737		Q5PR19	223 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	MFSD4B	Q5TF39	518 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	CDKAL1	Q5VV42	579 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	WDR53	Q7Z5U6	358 aa	Predicted RBP	12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	ZC3H7A	Q8IWR0	971 aa	Known RBP	12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	LMNTD1	Q8N9Z9	388 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	OR13C4	Q8NGS5	318 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	OR2L8	Q8NGY9	312 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	OLFM3	Q96PB7	478 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	ERGIC2	Q96RQ1	377 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	ISCU	Q9H1K1	167 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	MYO6	Q9UM54	1294 aa		12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.97	□□□□□ -0.33
SMG1-213	ENST00000567737	LGALS16	A8MUM7	142 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	KLRC4-KLRK1	H3BQV0	150 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	APOL1	O14791	398 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	CRLF1	O75462	422 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	PDE9A	O76083	593 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	AP2A2	O94973	939 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	FTH1	P02794	183 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	RFC3	P40938	356 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	CYB561	P49447	251 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	EFNA3	P52797	238 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	MPP3	Q13368	585 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	DAZAP2	Q15038	168 aa	Predicted RBP	12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	SYT16	Q17RD7	645 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	PRTG	Q2VWP7	1150 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	CMPK2	Q5EBM0	449 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	PAOX	Q6QHF9	649 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	NPNT	Q6UXI9	565 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	LANCL3	Q6ZV70	420 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	RNF44	Q7L0R7	432 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	SERPINA9	Q86WD7	417 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	LGI4	Q8N135	537 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	TMEM158	Q8WZ71	300 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	OXNAD1	Q96HP4	312 aa	Predicted RBP	12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	IL17F	Q96PD4	163 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	CYTH2	Q99418	400 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	TTYH2	Q9BSA4	534 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	MENT	Q9BUN1	341 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	VN1R1	Q9GZP7	353 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	CDCP1	Q9H5V8	836 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	MMP25	Q9NPA2	562 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	CIDEB	Q9UHD4	219 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	TRPS1	Q9UHF7	1281 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	SLC39A10	Q9ULF5	831 aa		12.96	□□□□□ -0.33
SMG1-213	ENST00000567737	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.95	□□□□□ -0.34
SMG1-213	ENST00000567737		A0A0G2JNJ9	132 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	LRRC53	A6NM62	1247 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	FIGNL2	A6NMB9	653 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	QSOX1	O00391	747 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	CRTAM	O95727	393 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	RPN2	P04844	631 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	CYC1	P08574	325 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	CD53	P19397	219 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	KDELR1	P24390	212 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	ACVR2A	P27037	513 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	MC4R	P32245	332 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	CDKN1C	P49918	316 aa	Predicted RBP	12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	MINDY4	Q4G0A6	757 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	GXYLT1	Q4G148	440 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	DNAJC21	Q5F1R6	531 aa	Known RBP	12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	SLC9A4	Q6AI14	798 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	B3GNT6	Q6ZMB0	384 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	TAS2R42	Q7RTR8	314 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	LIX1L	Q8IVB5	337 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	LRRC46	Q96FV0	321 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737		Q96MF0	132 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	FCRL5	Q96RD9	977 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	SECISBP2	Q96T21	854 aa	Known RBP	12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	ZFYVE21	Q9BQ24	234 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	MAK16	Q9BXY0	300 aa	Known RBP	12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	PLEKHF2	Q9H8W4	249 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.95	□□□□□ -0.34
SMG1-213	ENST00000567737		Q9UFV3	132 aa		12.95	□□□□□ -0.34
SMG1-213	ENST00000567737	PHF3	Q92576	2039 aa	Known RBP	12.95	□□□□□ -0.34
SMG1-213	ENST00000567737		A0A0A6YYC8	382 aa	Predicted RBP	12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	SLC5A10	A0PJK1	596 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	NPIPA2	E9PIF3	369 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	NPIPA3	F8WFD2	350 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737		I3L1I5	382 aa	Predicted RBP	12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	NDC80	O14777	642 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	GLI4	P10075	376 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms