RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 PARD6BQ9BYG5 372 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 MAGT1Q9H0U3 335 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 TMEM185BQ9H7F4 350 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 CLK4Q9HAZ1 481 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 PRMT8Q9NR22 394 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 KLHL28Q9NXS3 571 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 RBAKQ9NYW8 714 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 IL37Q9NZH6 218 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ERVK-18Q9QC07 812 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 KCNN3Q9UGI6 736 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 TMPRSS11EQ9UL52 423 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ANGEL1Q9UNK9 670 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 PSMD13Q9UNM6 376 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 AOX1Q06278 1338 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 FAM230AA0A1W2PPH8 454 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ESYT2A0FGR8 921 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 NPIPB13A6NJU9 1138 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 FAM170BA6NMN3 283 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 OR52A4PA6NMU1 304 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 C4orf47A7E2U8 309 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 PDZK1P1A8MUH7 402 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 NPIPB4C9JG80 1138 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ZNF561-AS1K7EIQ3 104 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ZNF701M0R085 212 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 RNMTO43148 476 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 COCHO43405 550 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 DYRK3O43781 588 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ADAM11O75078 769 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 RBMXL2O75526 392 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 ZNF821O75541 412 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 UFL1O94874 794 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 TNNC2P02585 160 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 IL6P05231 212 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ACAA1P09110 424 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 GPTP24298 496 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 KLRC1P26715 233 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 GABRA5P31644 462 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 MAP3K8P41279 467 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 RBM34P42696 430 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 ZNF75DP51815 510 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 NUDT6P53370 316 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ACSM1Q08AH1 577 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 USF2Q15853 346 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 EXT1Q16394 746 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 FAM47AQ5JRC9 791 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 CATSPEREQ5SY80 951 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 PDZK1Q5T2W1 519 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 FKBP1CQ5VVH2 108 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 EEF1DP3Q658K8 133 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 E4F1Q66K89 784 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 TMEM81Q6P7N7 255 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 INO80CQ6PI98 192 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 SYVN1Q86TM6 617 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 TIGD4Q8IY51 512 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 GLMPQ8WWB7 406 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 DNAJB3Q8WWF6 145 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ZSWIM3Q96MP5 696 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 HIST1H2AAQ96QV6 131 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 PRMT1Q99873 361 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 IDI2Q9BXS1 227 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 THAP2Q9H0W7 228 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 RNF208Q9H0X6 261 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 SRD5A3Q9H8P0 318 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 SLC6A13Q9NSD5 602 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 AP5S1Q9NUS5 200 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 TRIM10Q9UDY6 481 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 CNOT8Q9UFF9 292 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 POLLQ9UGP5 575 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 BCAP29Q9UHQ4 241 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 CNOT11Q9UKZ1 510 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D24Q9ULP9 559 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 DRG1Q9Y295 367 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 CMAHPQ9Y471 501 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 PCDHGC4Q9Y5F7 938 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 MTCH2Q9Y6C9 303 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 LOC100509620A0A075B734 347 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 MEX3AA1L020 520 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 MAGEA13PA6NCF6 341 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ERI2A8K979 691 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 KDM4EB2RXH2 506 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 PRAMEF26H0Y7S4 382 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ACOT7O00154 380 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 F2RL2O00254 374 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 TRAFD1O14545 582 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 GPR171O14626 319 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 HSPA12AO43301 675 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 PLRG1O43660 514 aaKnown RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 LANCL1O43813 399 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 PRAMEF11O60813 436 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 ATP9AO75110 1047 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 SEMA3DO95025 777 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 AHSA1O95433 338 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 CBX7O95931 251 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 SCG5P05408 212 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 GNAO1P09471 354 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 RRASP10301 218 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 SLC2A3P11169 496 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 PIM1P11309 404 aaPredicted RBP2.98□□□□□ -1.93
CHD9-216ENST00000565803 LYL1P12980 280 aa2.98□□□□□ -1.93
CHD9-216ENST00000565803 GNSP15586 552 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms