RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SH2B3Q9UQQ2 575 aa10.69□□□□□ -0.7
SF3B3-205ENST00000564899 PCDHB11Q9Y5F2 797 aa10.69□□□□□ -0.7
SF3B3-205ENST00000564899 TMEM131Q92545 1883 aa10.69□□□□□ -0.7
SF3B3-205ENST00000564899 A0A0G2JND7 137 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 OR6C74A6NCV1 312 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 MATN2O00339 956 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 BTN3A3O00478 584 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 HGSO14964 777 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-205ENST00000564899 HDAC3O15379 428 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 UGDHO60701 494 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 SKAP2O75563 359 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-205ENST00000564899 CHEK2O96017 543 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 CAPN1P07384 714 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 GIMD1P0DJR0 217 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 UROSP10746 265 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 HGFP14210 728 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 PLA2G2AP14555 144 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 ALOX15P16050 662 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-205ENST00000564899 GNAZP19086 355 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 PSMB5P28074 263 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 PEBP1P30086 187 aaKnown RBP10.68□□□□□ -0.7
SF3B3-205ENST00000564899 HMOX2P30519 316 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 AQP5P55064 265 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 SLC14A1Q13336 389 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 TERF2Q15554 542 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 GGTA1PQ4G0N0 100 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 GKAP1Q5VSY0 366 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-205ENST00000564899 FAM219BQ5XKK7 198 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 EFL1Q7Z2Z2 1120 aaKnown RBP10.68□□□□□ -0.7
SF3B3-205ENST00000564899 KANSL1Q7Z3B3 1105 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 MAVSQ7Z434 540 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 PIGWQ7Z7B1 504 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 C17orf64Q86WR6 236 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 SLC35F3Q8IY50 421 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 OR10G6Q8NH81 332 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 METTL6Q8TCB7 284 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 TWIST2Q8WVJ9 160 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 NEIL2Q969S2 332 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 DCBLD2Q96PD2 775 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 SLC38A3Q99624 504 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 TBC1D10AQ9BXI6 508 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-205ENST00000564899 SLC29A3Q9BZD2 475 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 NUF2Q9BZD4 464 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 UCK1Q9HA47 277 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 SPHK1Q9NYA1 384 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 RNF11Q9Y3C5 154 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 TIMM22Q9Y584 194 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 KNTC1P50748 2209 aa10.68□□□□□ -0.7
SF3B3-205ENST00000564899 KCNE1BA0A087WTH5 132 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 A0A087WV48 116 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 PIPSLA2A3N6 862 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 GSAPA4D1B5 854 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 LILRA5A6NI73 299 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 TRPC5OSA6NMA1 111 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 EIF4E1BA6NMX2 242 aaKnown RBP10.67□□□□□ -0.7
SF3B3-205ENST00000564899 RHPN2P1A8MT19 583 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 ISM1B1AKI9 464 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 PYCARD-AS1I3L0S3 204 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 ZNF195O14628 629 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 FFAR3O14843 346 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 PPM1DO15297 605 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 GPR42O15529 346 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 PRAMEF4O60810 478 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 CCNDBP1O95273 360 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 CDH1P12830 882 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 POLR2CP19387 275 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-205ENST00000564899 VARSP26640 1264 aaKnown RBP10.67□□□□□ -0.7
SF3B3-205ENST00000564899 SERPINB3P29508 390 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 ARFIP2P53365 341 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 BTKQ06187 659 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 PCDH1Q08174 1060 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 DOC2AQ14183 400 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 KIR2DS3Q14952 304 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 TBCCQ15814 346 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 CPSF6Q16630 551 aaKnown RBP eCLIP10.67□□□□□ -0.7
SF3B3-205ENST00000564899 TCHHL1Q5QJ38 904 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-205ENST00000564899 CATSPEREQ5SY80 951 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 VWA5B1Q5TIE3 1220 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 PRAMEF9Q5VWM5 478 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 LIPJQ5W064 366 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 ICE2Q659A1 982 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 ATG9BQ674R7 924 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 GRHL2Q6ISB3 625 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 ZCCHC8Q6NZY4 707 aaKnown RBP10.67□□□□□ -0.7
SF3B3-205ENST00000564899 PCSK4Q6UW60 755 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 NXPE4Q6UWF7 544 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 SLCO4C1Q6ZQN7 724 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 OOSP2Q86WS3 158 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 ADGRF3Q8IZF5 1079 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 L3MBTL4Q8NA19 623 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 CCDC197Q8NCU1 140 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 OR2A1Q8NGT9 310 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 OR4C6Q8NH72 309 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 C10orf82Q8WW14 230 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 SLC22A18Q96BI1 424 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 PTCD3Q96EY7 689 aaKnown RBP10.67□□□□□ -0.7
SF3B3-205ENST00000564899 EFCAB11Q9BUY7 163 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 TMEM120AQ9BXJ8 343 aa10.67□□□□□ -0.7
SF3B3-205ENST00000564899 EHD1Q9H4M9 534 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms