RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ZNF28P17035 718 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 AGXTP21549 392 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 GDF5P43026 501 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 GABRA4P48169 554 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 HSPA7P48741 367 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 RPS15AP62244 130 aaKnown RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 TGIF1Q15583 401 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 ZXDCQ2QGD7 858 aaPredicted RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 WASHC2DQ5SRD0 308 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 DTX1Q86Y01 620 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 PLD6Q8N2A8 252 aaKnown RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 RIBC1Q8N443 379 aaPredicted RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 ZNF655Q8N720 491 aaPredicted RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 SNX31Q8N9S9 440 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 PDPRQ8NCN5 879 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 OR2W6PQ8NHA6 318 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 EPS8L3Q8TE67 593 aaKnown RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 SLC5A11Q8WWX8 675 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 THAP11Q96EK4 314 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 GPR78Q96P69 363 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 OR4K3Q96R72 315 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 MRPL57Q9BQC6 102 aaKnown RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 EFHD1Q9BUP0 239 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 CD244Q9BZW8 370 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 TXLNGQ9NUQ3 528 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 DNAJC11Q9NVH1 559 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 CUEDC1Q9NWM3 386 aaPredicted RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 CPSF2Q9P2I0 782 aaKnown RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 SRPK3Q9UPE1 567 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 ANGPTL3Q9Y5C1 460 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 APC2O95996 2303 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 IGKV1-8A0A0C4DH67 115 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 SRRM3A6NNA2 597 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-208ENST00000564703 H0YGG7 62 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 GOLGA8RI6L899 631 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 TAPBPO15533 448 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 HCRTR1O43613 425 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 SMIM24O75264 130 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 TIAF1O95411 115 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 DLGAP3O95886 979 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 GSTA1P08263 222 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 PYGBP11216 843 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 ALAS2P22557 587 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 CXCR2P25025 360 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 CCT5P48643 541 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 ARF3P61204 181 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-208ENST00000564703 ABHD18Q0P651 414 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 CLN3Q13286 438 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 PFKFB4Q16877 469 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 C18orf21Q32NC0 220 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-208ENST00000564703 PRAMEF17Q5VTA0 474 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 YOD1Q5VVQ6 348 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-208ENST00000564703 RNF44Q7L0R7 432 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 TIPARPQ7Z3E1 657 aaKnown RBP15.3■□□□□ 0.04
RAB40C-208ENST00000564703 SPACA3Q8IXA5 215 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 ABHD11Q8NFV4 315 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 AHCTF1Q8WYP5 2266 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 MR1Q95460 341 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 NEIL2Q969S2 332 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 ESAMQ96AP7 390 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 RNF31Q96EP0 1072 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 LRFN5Q96NI6 719 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 CCNL2Q96S94 520 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-208ENST00000564703 AIF1LQ9BQI0 150 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 MRPL46Q9H2W6 279 aaKnown RBP15.3■□□□□ 0.04
RAB40C-208ENST00000564703 ZNF358Q9NW07 568 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 GPRC5BQ9NZH0 403 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 NDOR1Q9UHB4 597 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 PLAAQ9Y263 795 aa15.3■□□□□ 0.04
RAB40C-208ENST00000564703 TNPO3Q9Y5L0 923 aaKnown RBP15.3■□□□□ 0.04
RAB40C-208ENST00000564703 SDK2Q58EX2 2172 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 A0A087WV48 116 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 LOC105369274A0A096LPK9 316 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 LOC102723532A0A0G2JNH3 316 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 A0A1W2PPM1 405 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 HYKKA2RU49 373 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 MEN1O00255 615 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 HAT1O14929 419 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 C1GALT1C1LP0DN25 315 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 TAC1P20366 129 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 SLC6A12P48065 614 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 ALDH18A1P54886 795 aaKnown RBP15.29■□□□□ 0.04
RAB40C-208ENST00000564703 UCNP55089 124 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 CSNK1G2P78368 415 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 CDC16Q13042 620 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 PDK4Q16654 411 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 FBXO48Q5FWF7 155 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 TECRLQ5HYJ1 363 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 FRMPD2BQ6IN97 320 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 NXPE4Q6UWF7 544 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 KLHDC8AQ8IYD2 350 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 OR4N4Q8N0Y3 316 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 ZSCAN1Q8NBB4 408 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 HNRNPLLQ8WVV9 542 aaKnown RBP15.29■□□□□ 0.04
RAB40C-208ENST00000564703 OR2A5Q96R48 311 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 DPH2Q9BQC3 489 aaPredicted RBP15.29■□□□□ 0.04
RAB40C-208ENST00000564703 PELI2Q9HAT8 420 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 PRM3Q9NNZ6 103 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 LHX9Q9NQ69 397 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 STARD5Q9NSY2 213 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms