RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 MYO1FO00160 1098 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 CCL22O00626 93 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 PPP1R12AO14974 1030 aaPredicted RBP7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 FKBP9O95302 570 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 TPM2P07951 284 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 C8orf89P0DMQ9 161 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 ITGALP20701 1170 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 PSMB5P28074 263 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 ADRA1AP35348 466 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 SSR1P43307 286 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 COPS2P61201 443 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 MPP3Q13368 585 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 BRD3Q15059 726 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 MAPKAPK3Q16644 382 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 FIGNQ5HY92 759 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 FBXO42Q6P3S6 717 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 RANBP10Q6VN20 620 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 ACAD11Q709F0 780 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 CPEB2Q7Z5Q1 589 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 VSIG1Q86XK7 387 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 PIANPQ8IYJ0 282 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 ZNF567Q8N184 647 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 MYRIPQ8NFW9 859 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 OR2L8Q8NGY9 312 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 GOT1L1Q8NHS2 421 aaPredicted RBP7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 SLC22A18Q96BI1 424 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 CYTH2Q99418 400 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 VN1R1Q9GZP7 353 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 HSD3B7Q9H2F3 369 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 KCNK13Q9HB14 408 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 CIDEBQ9UHD4 219 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 EDARQ9UNE0 448 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 RUVBL1Q9Y265 456 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 FAM169AQ9Y6X4 670 aa7.27□□□□□ -1.25
HERPUD1-206ENST00000563343 A0A0G2JNJ9 132 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 A0A0U1RQJ8 604 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 A0A1W2PPV9 198 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 H0YGG7 62 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 H7C0S8 307 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 CDK2AP1O14519 115 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 APOL1O14791 398 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 HS6ST1O60243 411 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 SLC25A12O75746 678 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 SUN1O94901 812 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 PROSCO94903 275 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 AP2A2O94973 939 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 FREM3P0C091 2139 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 SKILP12757 684 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 CD53P19397 219 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 MC4RP32245 332 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 ADH7P40394 386 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 KIR2DL3P43628 341 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 ZFP36L2P47974 494 aaKnown RBP7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 ARF3P61204 181 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 DCAF7P61962 342 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 NKX6-1P78426 367 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 TYRO3Q06418 890 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 KLHL30Q0D2K2 578 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 DAZAP2Q15038 168 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 SF1Q15637 639 aaKnown RBP7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 DBN1Q16643 649 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 HKDC1Q2TB90 917 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 GPR33Q49SQ1 333 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 FLYWCH1Q4VC44 716 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 SHEQ5VZ18 495 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 RTL6Q6ICC9 239 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 BLOC1S3Q6QNY0 202 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 UNC5DQ6UXZ4 953 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 CXorf67Q86X51 503 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 VRK3Q8IV63 474 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 LGI4Q8N135 537 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 ZFP62Q8NB50 900 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 POGLUT1Q8NBL1 392 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 OR2L3Q8NG85 312 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 OR52N2Q8NGI0 321 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 OR2A1Q8NGT9 310 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 M1APQ8TC57 530 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 ELMO1Q92556 727 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 MMABQ96EY8 250 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 CABS1Q96KC9 395 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 TTYH2Q9BSA4 534 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 MMP25Q9NPA2 562 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 PNPLA3Q9NST1 481 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 Q9UFV3 132 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 CDC14AQ9UNH5 594 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 FAM215AQ9Y5M1 114 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 ALG6Q9Y672 507 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 HEATR5AQ86XA9 2040 aa7.26□□□□□ -1.25
HERPUD1-206ENST00000563343 A0A0A6YYC8 382 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 A0A1W2PPR1 153 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 OR2W5A6NFC9 320 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 H7C1Q1 480 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 I3L1I5 382 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 TFECO14948 347 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 PRPF4O43172 522 aaKnown RBP eCLIP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 KDM1AO60341 852 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 CDC40O60508 579 aaKnown RBP eCLIP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 EIF2S1P05198 315 aaKnown RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 CYC1P08574 325 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 GLI4P10075 376 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms