RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HTATSF1O43719 755 aaKnown RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 ZBTB14O43829 449 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 RTN2O75298 545 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC22A3O75751 556 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 OLFM2O95897 454 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 PNPP00491 289 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 IGHV4-38-2P0DP08 117 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SAGP10523 405 aaPredicted RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 GAP43P17677 238 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SSTR1P30872 391 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 CLK1P49759 484 aaKnown RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 LBX1P52954 281 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SNU13P55769 128 aaKnown RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 POLR2FP61218 127 aaKnown RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 PHEXP78562 749 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 MAT1AQ00266 395 aaKnown RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 PRKCZQ05513 592 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 MAPK11Q15759 364 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 PTGISQ16647 500 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 KBTBD12Q3ZCT8 623 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 DNAJC21Q5F1R6 531 aaKnown RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 TECRLQ5HYJ1 363 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 WDR38Q5JTN6 314 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SPDYCQ5MJ68 293 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 STPG1Q5TH74 334 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 NHLRC1Q6VVB1 395 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 TOM1L2Q6ZVM7 507 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SERPINA12Q8IW75 414 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 LGI2Q8N0V4 545 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 ZNF619Q8N2I2 560 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 ZNF843Q8N446 348 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 BMPERQ8N8U9 685 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 CCDC63Q8NA47 563 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SMYD1Q8NB12 490 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 OR4K1Q8NGD4 311 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 RNASE8Q8TDE3 154 aaKnown RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 UBLCP1Q8WVY7 318 aaPredicted RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 IRGQQ8WZA9 623 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SGF29Q96ES7 293 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC47A1Q96FL8 570 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 FAM20AQ96MK3 541 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 PANX3Q96QZ0 392 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 MYADMQ96S97 322 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 ATP6V0BQ99437 205 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 URM1Q9BTM9 101 aaKnown RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 ZNF350Q9GZX5 532 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 P2RY12Q9H244 342 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SDF2L1Q9HCN8 221 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 ZNF701Q9NV72 531 aaPredicted RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 VPS18Q9P253 973 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 LRWD1Q9UFC0 647 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 RUVBL2Q9Y230 463 aaKnown RBP2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 RIPK3Q9Y572 518 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 SMCHD1A6NHR9 2005 aa2.98□□□□□ -1.93
SHCBP1-202ENST00000563219 H0YIG0 161 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 PLOD2O00469 737 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 NTN3O00634 580 aaPredicted RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC30A4O14863 429 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 FLRT2O43155 660 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 RNASEH1O60930 286 aaKnown RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 BCAS2O75934 225 aaPredicted RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 GLCEO94923 617 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 TSHBP01222 138 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 DLATP10515 647 aaKnown RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 PCP11498 1178 aaKnown RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 IRF2P14316 349 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 LIFP15018 202 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 EZRP15311 586 aaKnown RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 EPCAMP16422 314 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 PIK3R1P27986 724 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 TIA1P31483 386 aaKnown RBP eCLIP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 NPBWR1P48145 328 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC12A3P55017 1021 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 MFAP3P55082 362 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 IL1RL1Q01638 556 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 WASHC5Q12768 1159 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 NPTX1Q15818 432 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 SGCBQ16585 318 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 CDO1Q16878 200 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 UGT3A2Q3SY77 523 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 ZC2HC1CQ53FD0 456 aaPredicted RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 OTUD3Q5T2D3 398 aaPredicted RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 ETFRF1Q6IPR1 90 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 BTN2A1Q7KYR7 527 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC26A9Q7LBE3 791 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 TRMT1LQ7Z2T5 733 aaKnown RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 AMIGO1Q86WK6 493 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 EID3Q8N140 333 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 RYBPQ8N488 228 aaPredicted RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 CLEC1AQ8NC01 280 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 OLIG1Q8TAK6 271 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 CCDC107Q8WV48 283 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 ZNF354BQ96LW1 612 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 EPYCQ99645 322 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 TRIM7Q9C029 511 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC39A8Q9C0K1 460 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 ABCG8Q9H221 673 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 TNMDQ9H2S6 317 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 RIMS4Q9H426 269 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms