RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 RNF186Q9NXI6 227 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 DDX43Q9NXZ2 648 aaKnown RBP4.94□□□□□ -1.62
LINC00557-201ENST00000563184 TMEM181Q9P2C4 612 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 PYGO1Q9Y3Y4 419 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 SNURFLB1AK76 121 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 HHLA1C9JL84 531 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 ST8SIA3O43173 380 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 SLU7O95391 586 aaKnown RBP4.93□□□□□ -1.62
LINC00557-201ENST00000563184 RAF1P04049 648 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 ATP1B1P05026 303 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 MUTP22033 750 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 DUTP33316 252 aaKnown RBP4.93□□□□□ -1.62
LINC00557-201ENST00000563184 TNNT3P45378 269 aaPredicted RBP4.93□□□□□ -1.62
LINC00557-201ENST00000563184 NR0B1P51843 470 aaKnown RBP4.93□□□□□ -1.62
LINC00557-201ENST00000563184 LCN1P1Q5VSP4 162 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 CTR9Q6PD62 1173 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 PRSS55Q6UWB4 352 aaPredicted RBP4.93□□□□□ -1.62
LINC00557-201ENST00000563184 BTN2A1Q7KYR7 527 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 AMIGO1Q86WK6 493 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 DZIP1Q86YF9 867 aaKnown RBP4.93□□□□□ -1.62
LINC00557-201ENST00000563184 LRTM2Q8N967 370 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 NHLRC2Q8NBF2 726 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 SUSD6Q92537 303 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 PGM2Q96G03 612 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 DESI2Q9BSY9 194 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 PI4K2AQ9BTU6 479 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 SDCBP2Q9H190 292 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 RAVER2Q9HCJ3 691 aaKnown RBP4.93□□□□□ -1.62
LINC00557-201ENST00000563184 MAN1B1Q9UKM7 699 aa4.93□□□□□ -1.62
LINC00557-201ENST00000563184 A0A087WW49 117 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 A4D1N5 150 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 PRSS46E5RG02 174 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 H0YAE9 185 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 LINC01565O15544 149 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 TGDSO95455 350 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 HMBSP08397 361 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 ANKRD34CP0C6C1 535 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 F3P13726 295 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 KCNJ1P48048 391 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 CRIP2P52943 208 aaPredicted RBP4.92□□□□□ -1.62
LINC00557-201ENST00000563184 TEAD2Q15562 447 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 RBBP7Q16576 425 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 MEP1BQ16820 701 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 SLC25A47Q6Q0C1 308 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 OTOAQ7RTW8 1153 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 LACC1Q8IV20 430 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 UXS1Q8NBZ7 420 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 OR5AP2Q8NGF4 316 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 APOBEC4Q8WW27 367 aaKnown RBP4.92□□□□□ -1.62
LINC00557-201ENST00000563184 BSCL2Q96G97 398 aaPredicted RBP4.92□□□□□ -1.62
LINC00557-201ENST00000563184 PARK7Q99497 189 aaKnown RBP4.92□□□□□ -1.62
LINC00557-201ENST00000563184 RAB9BQ9NP90 201 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 PKD2L2Q9NZM6 624 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 OR6C2Q9NZP2 312 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 EPHA6Q9UF33 1036 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 ITGA11Q9UKX5 1188 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 CDH7Q9ULB5 785 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 KLK4Q9Y5K2 254 aa4.92□□□□□ -1.62
LINC00557-201ENST00000563184 ZFP37Q9Y6Q3 630 aaPredicted RBP4.92□□□□□ -1.62
LINC00557-201ENST00000563184 EPHB6O15197 1021 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 EXTL3O43909 919 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 SEC24AO95486 1093 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 RLN1P04808 185 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 HSP90AB1P08238 724 aaKnown RBP4.91□□□□□ -1.62
LINC00557-201ENST00000563184 DNA2P51530 1060 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 LBX1P52954 281 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 SULT2A1Q06520 285 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 OPCMLQ14982 345 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 E2F5Q15329 346 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 TYSND1Q2T9J0 566 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 TMEM30BQ3MIR4 351 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 ADAMTSL4-AS1Q5T5F5 129 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 NHLRC1Q6VVB1 395 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 LEKR1Q6ZMV7 388 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 CPEB2Q7Z5Q1 589 aaKnown RBP4.91□□□□□ -1.62
LINC00557-201ENST00000563184 RCOR2Q8IZ40 523 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 ATAD1Q8NBU5 361 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 SLC37A3Q8NCC5 494 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 OR7A2PQ8NGA2 310 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 DUX3Q96PT4 197 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 GPATCH1Q9BRR8 931 aaKnown RBP4.91□□□□□ -1.62
LINC00557-201ENST00000563184 CDK19Q9BWU1 502 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 ALDH8A1Q9H2A2 487 aaPredicted RBP4.91□□□□□ -1.62
LINC00557-201ENST00000563184 RIMS4Q9H426 269 aaPredicted RBP4.91□□□□□ -1.62
LINC00557-201ENST00000563184 SCRT2Q9NQ03 307 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 MAN2C1Q9NTJ4 1040 aa4.91□□□□□ -1.62
LINC00557-201ENST00000563184 C19orf25Q9UFG5 118 aaPredicted RBP4.91□□□□□ -1.62
LINC00557-201ENST00000563184 NOL7Q9UMY1 257 aaKnown RBP4.91□□□□□ -1.62
LINC00557-201ENST00000563184 MTMR11A4FU01 709 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 YDJCA8MPS7 323 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 VTNP04004 478 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 ZNF26P17031 533 aaPredicted RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 CEBPBP17676 345 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 SP100P23497 879 aaPredicted RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 TCF7P36402 384 aaPredicted RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 LEPRP48357 1165 aaKnown RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 MYL7Q01449 175 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 NFE2L1Q14494 772 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 ZNF74Q16587 644 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 TTC27Q6P3X3 843 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms