RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SIGLEC11Q96RL6 698 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 BARD1Q99728 777 aaKnown RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 CPEB1Q9BZB8 566 aaKnown RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 SUV39H2Q9H5I1 410 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 NMRK2Q9NPI5 230 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 RNF186Q9NXI6 227 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 KIF17Q9P2E2 1029 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 SAMHD1Q9Y3Z3 626 aaKnown RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 PLXNB3Q9ULL4 1909 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.68□□□□□ -0.38
USB1-207ENST00000563149 TMEM221A6NGB7 291 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 ATP6V1G1O75348 118 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 MYO1DO94832 1006 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 LRATO95237 230 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 SOD2P04179 222 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 ABCB1P08183 1280 aaPredicted RBP12.68□□□□□ -0.38
USB1-207ENST00000563149 ATP1B2P14415 290 aaPredicted RBP12.68□□□□□ -0.38
USB1-207ENST00000563149 UGT2B10P36537 528 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 MAP2K4P45985 399 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 ASMTP46597 345 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 MASP1P48740 699 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 EPHB3P54753 998 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 RPS3AP61247 264 aaKnown RBP12.68□□□□□ -0.38
USB1-207ENST00000563149 TUBA1BP68363 451 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 VLDLRP98155 873 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 PTSQ03393 145 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 PCDH1Q08174 1060 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 LMAN2Q12907 356 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 NPRL3Q12980 569 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 CHIT1Q13231 466 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 CYP2A13Q16696 494 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 DGKKQ5KSL6 1271 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 UBE2UQ5VVX9 321 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 MLIPQ5VWP3 458 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 LRRC66Q68CR7 880 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 ZNF621Q6ZSS3 439 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 HTR3DQ70Z44 454 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 TUBA1AQ71U36 451 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 RASGRP3Q8IV61 690 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 KLHDC8AQ8IYD2 350 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 MFSD4AQ8N468 514 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 ARL14EPQ8N8R7 260 aaPredicted RBP12.68□□□□□ -0.38
USB1-207ENST00000563149 ATG16L2Q8NAA4 619 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 TAMM41Q96BW9 452 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 HSH2DQ96JZ2 352 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 VN1R3Q9BXE9 311 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 PLCXD1Q9NUJ7 323 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 TRNAU1APQ9NX07 287 aaKnown RBP12.68□□□□□ -0.38
USB1-207ENST00000563149 VPS29Q9UBQ0 182 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 BTNL2Q9UIR0 455 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 MAFFQ9ULX9 164 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 DOLKQ9UPQ8 538 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 SLC22A14Q9Y267 594 aa12.68□□□□□ -0.38
USB1-207ENST00000563149 OR2A25A4D2G3 310 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 KRBA1A5PL33 1030 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 AP2A2O94973 939 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 COX7A2P14406 83 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 PTX3P26022 381 aaPredicted RBP12.67□□□□□ -0.38
USB1-207ENST00000563149 PSMB9P28065 219 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 PXNP49023 591 aaPredicted RBP12.67□□□□□ -0.38
USB1-207ENST00000563149 PFN3P60673 137 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 TEKQ02763 1124 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 HSPA14Q0VDF9 509 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 RAB33AQ14088 237 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 INAQ16352 499 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 ANXA8L1Q5VT79 327 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 LAIR1Q6GTX8 287 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 CAMKMTQ7Z624 323 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 VPS37AQ8NEZ2 397 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 OR10Q1Q8NGQ4 319 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 NDNFQ8TB73 568 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 WDR20Q8TBZ3 569 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 ZFP90Q8TF47 636 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 HRASLS5Q96KN8 279 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 EMILIN2Q9BXX0 1053 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 GABARAPL3Q9BY60 117 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 BRF2Q9HAW0 419 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 SPATA6Q9NWH7 488 aaPredicted RBP12.67□□□□□ -0.38
USB1-207ENST00000563149 ADPRHL2Q9NX46 363 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 THUMPD1Q9NXG2 353 aaKnown RBP12.67□□□□□ -0.38
USB1-207ENST00000563149 PCDHGB3Q9Y5G1 929 aa12.67□□□□□ -0.38
USB1-207ENST00000563149 hCG_2039718K7EN88 272 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 PRAMEF4O60810 478 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 CPSF4O95639 269 aaKnown RBP12.66□□□□□ -0.38
USB1-207ENST00000563149 B3GALT4O96024 378 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 SRCP12931 536 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 CYP4B1P13584 511 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 HOXD10P28358 340 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 HNF4AP41235 474 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 SPINT3P49223 89 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 RPP38P78345 283 aaKnown RBP12.66□□□□□ -0.38
USB1-207ENST00000563149 IRF8Q02556 426 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 TEAD4Q15561 434 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 IQCCQ4KMZ1 466 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 PAGE2BQ5JRK9 111 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 PRAMEF9Q5VWM5 478 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 TUBA3EQ6PEY2 450 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 CCDC81Q6ZN84 652 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 LACC1Q8IV20 430 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms