RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 MRPL57Q9BQC6 102 aaKnown RBP12.86□□□□□ -0.35
CDH1-204ENST00000562118 ACAT2Q9BWD1 397 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 CNTNAP3Q9BZ76 1288 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 FAM117AQ9C073 453 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 VPS11Q9H270 941 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 EHD1Q9H4M9 534 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 PELI2Q9HAT8 420 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 XPR1Q9UBH6 696 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 TMCO1Q9UM00 188 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 PTPRQQ9UMZ3 2332 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 NBEAQ8NFP9 2946 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 A0A1W2PPM1 405 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 PABPN1LA6NDY0 278 aaKnown RBP12.85□□□□□ -0.35
CDH1-204ENST00000562118 TMEM150CB9EJG8 249 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 STX16-NPEPL1H3BU86 382 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 STX16O14662 325 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 MAP3K7O43318 606 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 PRAMEF4O60810 478 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 STK16O75716 305 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 REEP5Q00765 189 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 ZNF844Q08AG5 666 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 DEFB110Q30KQ9 67 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 C18orf21Q32NC0 220 aaPredicted RBP12.85□□□□□ -0.35
CDH1-204ENST00000562118 TCTE1Q5JU00 501 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 YOD1Q5VVQ6 348 aaPredicted RBP12.85□□□□□ -0.35
CDH1-204ENST00000562118 PRAMEF9Q5VWM5 478 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 FRMPD2BQ6IN97 320 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 RHBDD2Q6NTF9 364 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 TLDC1Q6P9B6 456 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 FOXR1Q6PIV2 292 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 VN1R4Q7Z5H5 301 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 TRABD2AQ86V40 505 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 SLC38A9Q8NBW4 561 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 SNRNP27Q8WVK2 155 aaKnown RBP12.85□□□□□ -0.35
CDH1-204ENST00000562118 SLC5A11Q8WWX8 675 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 NKD1Q969G9 470 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 CD244Q9BZW8 370 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 MRPL46Q9H2W6 279 aaKnown RBP12.85□□□□□ -0.35
CDH1-204ENST00000562118 CNOT10Q9H9A5 744 aaKnown RBP12.85□□□□□ -0.35
CDH1-204ENST00000562118 PCMTD2Q9NV79 361 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 EMCNQ9ULC0 261 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 SLC22A14Q9Y267 594 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 AP1M2Q9Y6Q5 423 aa12.85□□□□□ -0.35
CDH1-204ENST00000562118 MGAQ8IWI9 3026 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 H7BY64 318 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 TK2O00142 265 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 HAT1O14929 419 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 ZSCAN9O15535 394 aaPredicted RBP12.84□□□□□ -0.35
CDH1-204ENST00000562118 CPNE3O75131 537 aaKnown RBP12.84□□□□□ -0.35
CDH1-204ENST00000562118 SCRG1O75711 98 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 PYGBP11216 843 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 CDH1P12830 882 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 CRHR1P34998 444 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 STAT5AP42229 794 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 GDF5P43026 501 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 SLCO1A2P46721 670 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 GLRBP48167 497 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 RPS15AP62244 130 aaKnown RBP12.84□□□□□ -0.35
CDH1-204ENST00000562118 ABHD18Q0P651 414 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 CDC16Q13042 620 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 TBCCQ15814 346 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 ATG9BQ674R7 924 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 NXPE4Q6UWF7 544 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 LRIG3Q6UXM1 1119 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 SLCO4C1Q6ZQN7 724 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 ZFAND4Q86XD8 727 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 DSELQ8IZU8 1212 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 PRAP1Q96NZ9 151 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 EGFL8Q99944 293 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 CAPS2Q9BXY5 557 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 ULBP3Q9BZM4 244 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 PITHD1Q9GZP4 211 aaPredicted RBP12.84□□□□□ -0.35
CDH1-204ENST00000562118 DNAJC11Q9NVH1 559 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 CD274Q9NZQ7 290 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 TMEM216Q9P0N5 145 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 TBK1Q9UHD2 729 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 SERTAD3Q9UJW9 196 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 RAXQ9Y2V3 346 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 KCNE2Q9Y6J6 123 aa12.84□□□□□ -0.35
CDH1-204ENST00000562118 LOC105369274A0A096LPK9 316 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 LOC102723532A0A0G2JNH3 316 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 TRBC2A0A5B9 178 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 NCF1BA6NI72 391 aaPredicted RBP12.83□□□□□ -0.36
CDH1-204ENST00000562118 NCF1CA8MVU1 366 aaPredicted RBP12.83□□□□□ -0.36
CDH1-204ENST00000562118 E7EQ34 232 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 H0YGG7 62 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 K7EPI3 171 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 AGRPO00253 132 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 E2F3O00716 465 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 RAD1O60671 282 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 OR2B3O76000 313 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 WFS1O76024 890 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 KIAA0754O94854 1291 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 WDR47O94967 919 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 MT-ND3P03897 115 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 CAPN1P07384 714 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 RPS17P08708 135 aaKnown RBP12.83□□□□□ -0.36
CDH1-204ENST00000562118 NCF1P14598 390 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms