RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HRASLS5Q96KN8 279 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 SPATA17Q96L03 361 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 GPR62Q9BZJ7 368 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 IL26Q9NPH9 171 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 LHX3Q9UBR4 397 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 GAPDHSO14556 408 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 CLDN7O95471 211 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 SEMG1P04279 462 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 RPLP2P05387 115 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 EPORP19235 508 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 RRM2P31350 389 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 SLC19A1P41440 591 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 CASP3P42574 277 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 IDH2P48735 452 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 TBCEQ15813 527 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 NDUFA5Q16718 116 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 PTOV1Q86YD1 416 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 METTL4Q8N3J2 472 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 ZNF675Q8TD23 568 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 ELMO1Q92556 727 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 CHCHD6Q9BRQ6 235 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 CDADC1Q9BWV3 514 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 OR51E2Q9H255 320 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 RETREG1Q9H6L5 497 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 RDH14Q9HBH5 336 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 MOV10Q9HCE1 1003 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 PSORS1C1Q9UIG5 152 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 GLYATL1P3A0A0U1RQE8 302 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 FAM47E-STBD1D6RA91 191 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 DSCR3O14972 297 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 ARHGEF15O94989 841 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 COX7A2P14406 83 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 MZF1P28698 734 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 COPZ1P61923 177 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 CHRNA6Q15825 494 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 CXorf57Q6NSI4 855 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 NOXRED1Q6NXP6 359 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 METTL2BQ6P1Q9 378 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 RSPO2Q6UXX9 243 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 SLC46A3Q7Z3Q1 461 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 CLECL1Q8IZS7 167 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 STX19Q8N4C7 294 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 RNF175Q8N4F7 328 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 ZNF486Q96H40 463 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 TPK1Q9H3S4 243 aa13.54□□□□□ -0.24
VPS9D1-202ENST00000561976 HAT1O14929 419 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 TLL1O43897 1013 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 FZD6O60353 706 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 APOA1P02647 267 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 DNTTP04053 509 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 BMP1P13497 986 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 GRK5P34947 590 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 DEFA1P59665 94 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 DEFA3P59666 94 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 RTN4RL1Q86UN2 441 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 GGHQ92820 318 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 Q96MT0 163 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 CDK5RAP1Q96SZ6 601 aaKnown RBP13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 TTPALQ9BTX7 342 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 NEK6Q9HC98 313 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 TRMT13Q9NUP7 481 aaKnown RBP13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 GPR83Q9NYM4 423 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 SPASTQ9UBP0 616 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 SCN10AQ9Y5Y9 1956 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 CLCA1A8K7I4 914 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 SUV39H1O43463 412 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 CCNKO75909 580 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 KRT8P05787 483 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 CDK1P06493 297 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 STSP08842 583 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 AMD1P17707 334 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 GPX2P18283 190 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 PRPS1L1P21108 318 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 PRKCDQ05655 676 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 GPR17Q13304 367 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 KRR1Q13601 381 aaKnown RBP13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 NEK5Q6P3R8 708 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 UBE2R2Q712K3 238 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 CHST9Q7L1S5 443 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 PGBD3Q8N328 593 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 SPPL2AQ8TCT8 520 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 PIH1D2Q8WWB5 315 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 TP63Q9H3D4 680 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 ADPRHL2Q9NX46 363 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 PCDHGB3Q9Y5G1 929 aa13.53□□□□□ -0.24
VPS9D1-202ENST00000561976 INPPL1O15357 1258 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 COCHO43405 550 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 VNN2O95498 520 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 GGT2P36268 569 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 ZXDBP98169 803 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 IFITM2Q01629 132 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 ARMCX4Q5H9R4 360 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 SPANXN2Q5MJ10 180 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 MACC1Q6ZN28 852 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 MSANTD1Q6ZTZ1 278 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 SLC24A5Q71RS6 500 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 SPATC1Q76KD6 591 aa13.52□□□□□ -0.24
VPS9D1-202ENST00000561976 GDPD3Q7L5L3 318 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms